Gene : Bradi3g49630 B. distachyon v3.1
Defline:  (1 of 2) PTHR23088//PTHR23088:SF31 - NITRILASE-RELATED Genomic Order:  6160
Name:  ? Bradi3g49630 Secondary Identifier:  ? PAC:32812579
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon ASPARAGINE-DEG1-PWY Brachypodium distachyon pathologic  
Bdistachyon ASPSYNII-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g49630 0.5kb upstream 0.5kb upstream 5795 true Bd3: 50695158-50700952 Brachypodium distachyon
Bradi3g49630 0.5kb upstream 0.5kb upstream 500 false Bd3: 50695158-50695657 Brachypodium distachyon
Bradi3g49630 0.5kb downstream 0.5kb downstream 5795 true Bd3: 50695658-50701452 Brachypodium distachyon
Bradi3g49630 0.5kb downstream 0.5kb downstream 500 false Bd3: 50700953-50701452 Brachypodium distachyon
Bradi3g49630 1.0kb upstream 1.0kb upstream 6295 true Bd3: 50694658-50700952 Brachypodium distachyon
Bradi3g49630 1.0kb upstream 1.0kb upstream 1000 false Bd3: 50694658-50695657 Brachypodium distachyon
Bradi3g49630 1.0kb downstream 1.0kb downstream 6295 true Bd3: 50695658-50701952 Brachypodium distachyon
Bradi3g49630 1.0kb downstream 1.0kb downstream 1000 false Bd3: 50700953-50701952 Brachypodium distachyon
Bradi3g49630 2.0kb upstream 2.0kb upstream 7295 true Bd3: 50693658-50700952 Brachypodium distachyon
Bradi3g49630 2.0kb upstream 2.0kb upstream 2000 false Bd3: 50693658-50695657 Brachypodium distachyon
Bradi3g49630 2.0kb downstream 2.0kb downstream 7295 true Bd3: 50695658-50702952 Brachypodium distachyon
Bradi3g49630 2.0kb downstream 2.0kb downstream 2000 false Bd3: 50700953-50702952 Brachypodium distachyon
Bradi3g49630 5.0kb upstream 5.0kb upstream 10295 true Bd3: 50690658-50700952 Brachypodium distachyon
Bradi3g49630 5.0kb upstream 5.0kb upstream 5000 false Bd3: 50690658-50695657 Brachypodium distachyon
Bradi3g49630 5.0kb downstream 5.0kb downstream 10295 true Bd3: 50695658-50705952 Brachypodium distachyon
Bradi3g49630 5.0kb downstream 5.0kb downstream 5000 false Bd3: 50700953-50705952 Brachypodium distachyon
Bradi3g49630 10.0kb upstream 10.0kb upstream 15295 true Bd3: 50685658-50700952 Brachypodium distachyon
Bradi3g49630 10.0kb upstream 10.0kb upstream 10000 false Bd3: 50685658-50695657 Brachypodium distachyon
Bradi3g49630 10.0kb downstream 10.0kb downstream 15295 true Bd3: 50695658-50710952 Brachypodium distachyon
Bradi3g49630 10.0kb downstream 10.0kb downstream 10000 false Bd3: 50700953-50710952 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569811 5269 Grass View MSA
122043736 5273 Angiosperm View MSA
121347314 5274 Embryophyte View MSA
123380526 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.102     High  
cufflinks 8.303        
cufflinks 9.902        
cufflinks 9.272        
cufflinks 11.996     High  
cufflinks 6.99       Low
cufflinks 6.995       Low
cufflinks 12.808     High  
cufflinks 8.427        
cufflinks 10.494     High  
cufflinks 12.782     High  
cufflinks 10.079     High  
cufflinks 9.157     High  
cufflinks 11.384     High  
cufflinks 19.867     High High
cufflinks 7.738        
cufflinks 14.78     High  
cufflinks 10.759        
cufflinks 5.895       Low
cufflinks 8.258        
cufflinks 10.297        
cufflinks 10.404     High  
cufflinks 12.756     High  
cufflinks 8.211        
cufflinks 6.635       Low
cufflinks 10.393        
cufflinks 10.845     High  
cufflinks 10.263        
cufflinks 10.858     High  
cufflinks 8.917        

0 Strain