Gene : Bradi3g50390 B. distachyon v3.1
Defline:  (1 of 1) PTHR15680:SF10 - 50S RIBOSOMAL PROTEIN L19-1, CHLOROPLASTIC-RELATED Genomic Order:  6256
Name:  ? Bradi3g50390 Secondary Identifier:  ? PAC:32822120
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g50390 0.5kb upstream 0.5kb upstream 4104 true Bd3: 51365457-51369560 Brachypodium distachyon
Bradi3g50390 0.5kb upstream 0.5kb upstream 500 false Bd3: 51369061-51369560 Brachypodium distachyon
Bradi3g50390 0.5kb downstream 0.5kb downstream 4104 true Bd3: 51364957-51369060 Brachypodium distachyon
Bradi3g50390 0.5kb downstream 0.5kb downstream 500 false Bd3: 51364957-51365456 Brachypodium distachyon
Bradi3g50390 1.0kb upstream 1.0kb upstream 4604 true Bd3: 51365457-51370060 Brachypodium distachyon
Bradi3g50390 1.0kb upstream 1.0kb upstream 1000 false Bd3: 51369061-51370060 Brachypodium distachyon
Bradi3g50390 1.0kb downstream 1.0kb downstream 4604 true Bd3: 51364457-51369060 Brachypodium distachyon
Bradi3g50390 1.0kb downstream 1.0kb downstream 1000 false Bd3: 51364457-51365456 Brachypodium distachyon
Bradi3g50390 2.0kb upstream 2.0kb upstream 5604 true Bd3: 51365457-51371060 Brachypodium distachyon
Bradi3g50390 2.0kb upstream 2.0kb upstream 2000 false Bd3: 51369061-51371060 Brachypodium distachyon
Bradi3g50390 2.0kb downstream 2.0kb downstream 5604 true Bd3: 51363457-51369060 Brachypodium distachyon
Bradi3g50390 2.0kb downstream 2.0kb downstream 2000 false Bd3: 51363457-51365456 Brachypodium distachyon
Bradi3g50390 5.0kb upstream 5.0kb upstream 8604 true Bd3: 51365457-51374060 Brachypodium distachyon
Bradi3g50390 5.0kb upstream 5.0kb upstream 5000 false Bd3: 51369061-51374060 Brachypodium distachyon
Bradi3g50390 5.0kb downstream 5.0kb downstream 8604 true Bd3: 51360457-51369060 Brachypodium distachyon
Bradi3g50390 5.0kb downstream 5.0kb downstream 5000 false Bd3: 51360457-51365456 Brachypodium distachyon
Bradi3g50390 10.0kb upstream 10.0kb upstream 13604 true Bd3: 51365457-51379060 Brachypodium distachyon
Bradi3g50390 10.0kb upstream 10.0kb upstream 10000 false Bd3: 51369061-51379060 Brachypodium distachyon
Bradi3g50390 10.0kb downstream 10.0kb downstream 13604 true Bd3: 51355457-51369060 Brachypodium distachyon
Bradi3g50390 10.0kb downstream 10.0kb downstream 10000 false Bd3: 51355457-51365456 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579316 5269 Grass View MSA
122047909 5273 Angiosperm View MSA
123428995 5275 Viridiplantae View MSA
121349577 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 94.966     High  
cufflinks 91.738     High  
cufflinks 89.092     High  
cufflinks 94.239     High  
cufflinks 61.609     High  
cufflinks 70.217     High  
cufflinks 87.736     High  
cufflinks 70.346     High  
cufflinks 61.217     High  
cufflinks 102.667     High  
cufflinks 45.789     High  
cufflinks 70.32     High  
cufflinks 48.882     High  
cufflinks 48.446     High  
cufflinks 63.177     High  
cufflinks 88.32     High  
cufflinks 100.212     High  
cufflinks 7.059       Low
cufflinks 78.071     High  
cufflinks 15.602     High Low
cufflinks 53.244     High  
cufflinks 82.056     High  
cufflinks 64.361     High  
cufflinks 60.609     High  
cufflinks 71.89     High  
cufflinks 96.23     High  
cufflinks 28.185     High Low
cufflinks 86.821     High  
cufflinks 84.103     High  
cufflinks 87.676     High  

0 Strain