Gene : Bradi3g50750 B. distachyon v3.1
Defline:  (1 of 60) PF03330 - Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Genomic Order:  6303
Name:  ? Bradi3g50750 Secondary Identifier:  ? PAC:32816750
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g50750 0.5kb upstream 0.5kb upstream 2246 true Bd3: 51631746-51633991 Brachypodium distachyon
Bradi3g50750 0.5kb upstream 0.5kb upstream 500 false Bd3: 51631746-51632245 Brachypodium distachyon
Bradi3g50750 0.5kb downstream 0.5kb downstream 2246 true Bd3: 51632246-51634491 Brachypodium distachyon
Bradi3g50750 0.5kb downstream 0.5kb downstream 500 false Bd3: 51633992-51634491 Brachypodium distachyon
Bradi3g50750 1.0kb upstream 1.0kb upstream 2746 true Bd3: 51631246-51633991 Brachypodium distachyon
Bradi3g50750 1.0kb upstream 1.0kb upstream 1000 false Bd3: 51631246-51632245 Brachypodium distachyon
Bradi3g50750 1.0kb downstream 1.0kb downstream 2746 true Bd3: 51632246-51634991 Brachypodium distachyon
Bradi3g50750 1.0kb downstream 1.0kb downstream 1000 false Bd3: 51633992-51634991 Brachypodium distachyon
Bradi3g50750 2.0kb upstream 2.0kb upstream 3746 true Bd3: 51630246-51633991 Brachypodium distachyon
Bradi3g50750 2.0kb upstream 2.0kb upstream 2000 false Bd3: 51630246-51632245 Brachypodium distachyon
Bradi3g50750 2.0kb downstream 2.0kb downstream 3746 true Bd3: 51632246-51635991 Brachypodium distachyon
Bradi3g50750 2.0kb downstream 2.0kb downstream 2000 false Bd3: 51633992-51635991 Brachypodium distachyon
Bradi3g50750 5.0kb upstream 5.0kb upstream 6746 true Bd3: 51627246-51633991 Brachypodium distachyon
Bradi3g50750 5.0kb upstream 5.0kb upstream 5000 false Bd3: 51627246-51632245 Brachypodium distachyon
Bradi3g50750 5.0kb downstream 5.0kb downstream 6746 true Bd3: 51632246-51638991 Brachypodium distachyon
Bradi3g50750 5.0kb downstream 5.0kb downstream 5000 false Bd3: 51633992-51638991 Brachypodium distachyon
Bradi3g50750 10.0kb upstream 10.0kb upstream 11746 true Bd3: 51622246-51633991 Brachypodium distachyon
Bradi3g50750 10.0kb upstream 10.0kb upstream 10000 false Bd3: 51622246-51632245 Brachypodium distachyon
Bradi3g50750 10.0kb downstream 10.0kb downstream 11746 true Bd3: 51632246-51643991 Brachypodium distachyon
Bradi3g50750 10.0kb downstream 10.0kb downstream 10000 false Bd3: 51633992-51643991 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585045 5269 Grass View MSA
122049839 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351768 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.643        
cufflinks 8.199        
cufflinks 5.577        
cufflinks 7.49        
cufflinks 58.094     High High
cufflinks 8.734        
cufflinks 10.432     High  
cufflinks 5.854        
cufflinks 9.183        
cufflinks 5.448        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 9.514     High  
cufflinks 0.098       Low
cufflinks 0.026     Low Low
cufflinks 1.775        
cufflinks 4.985        
cufflinks 12.884     High  
cufflinks 12.366     High  
cufflinks 7.975        
cufflinks 0.635       Low
cufflinks 11.106        
cufflinks 5.787        
cufflinks 7.974        
cufflinks 9.115        
cufflinks 13.321     High  
cufflinks 5.622        
cufflinks 0.269       Low
cufflinks 4.838        
cufflinks 5.301        
cufflinks 15.675     High  

0 Strain