Gene : Bradi3g57300 B. distachyon v3.1
Defline:  (1 of 1) PTHR21717:SF25 - MYB FAMILY TRANSCRIPTION FACTOR TRFL6-RELATED Genomic Order:  7116
Name:  ? Bradi3g57300 Secondary Identifier:  ? PAC:32813683
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g57300 0.5kb upstream 0.5kb upstream 6773 true Bd3: 56704641-56711413 Brachypodium distachyon
Bradi3g57300 0.5kb upstream 0.5kb upstream 500 false Bd3: 56710914-56711413 Brachypodium distachyon
Bradi3g57300 0.5kb downstream 0.5kb downstream 6773 true Bd3: 56704141-56710913 Brachypodium distachyon
Bradi3g57300 0.5kb downstream 0.5kb downstream 500 false Bd3: 56704141-56704640 Brachypodium distachyon
Bradi3g57300 1.0kb upstream 1.0kb upstream 7273 true Bd3: 56704641-56711913 Brachypodium distachyon
Bradi3g57300 1.0kb upstream 1.0kb upstream 1000 false Bd3: 56710914-56711913 Brachypodium distachyon
Bradi3g57300 1.0kb downstream 1.0kb downstream 7273 true Bd3: 56703641-56710913 Brachypodium distachyon
Bradi3g57300 1.0kb downstream 1.0kb downstream 1000 false Bd3: 56703641-56704640 Brachypodium distachyon
Bradi3g57300 2.0kb upstream 2.0kb upstream 8273 true Bd3: 56704641-56712913 Brachypodium distachyon
Bradi3g57300 2.0kb upstream 2.0kb upstream 2000 false Bd3: 56710914-56712913 Brachypodium distachyon
Bradi3g57300 2.0kb downstream 2.0kb downstream 8273 true Bd3: 56702641-56710913 Brachypodium distachyon
Bradi3g57300 2.0kb downstream 2.0kb downstream 2000 false Bd3: 56702641-56704640 Brachypodium distachyon
Bradi3g57300 5.0kb upstream 5.0kb upstream 11273 true Bd3: 56704641-56715913 Brachypodium distachyon
Bradi3g57300 5.0kb upstream 5.0kb upstream 5000 false Bd3: 56710914-56715913 Brachypodium distachyon
Bradi3g57300 5.0kb downstream 5.0kb downstream 11273 true Bd3: 56699641-56710913 Brachypodium distachyon
Bradi3g57300 5.0kb downstream 5.0kb downstream 5000 false Bd3: 56699641-56704640 Brachypodium distachyon
Bradi3g57300 10.0kb upstream 10.0kb upstream 16273 true Bd3: 56704641-56720913 Brachypodium distachyon
Bradi3g57300 10.0kb upstream 10.0kb upstream 10000 false Bd3: 56710914-56720913 Brachypodium distachyon
Bradi3g57300 10.0kb downstream 10.0kb downstream 16273 true Bd3: 56694641-56710913 Brachypodium distachyon
Bradi3g57300 10.0kb downstream 10.0kb downstream 10000 false Bd3: 56694641-56704640 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589901 5269 Grass View MSA
122046145 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121348022 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.806        
cufflinks 9.702        
cufflinks 9.883        
cufflinks 10.34       High
cufflinks 5.987       Low
cufflinks 7.931        
cufflinks 7.267        
cufflinks 7.868        
cufflinks 7.928        
cufflinks 7.642        
cufflinks 6.776        
cufflinks 9.846     High  
cufflinks 7.696     High  
cufflinks 6.799        
cufflinks 9.185     High  
cufflinks 8.12        
cufflinks 7.092        
cufflinks 9.166        
cufflinks 8.574        
cufflinks 4.283       Low
cufflinks 8.747        
cufflinks 9.438        
cufflinks 8.06        
cufflinks 8.092        
cufflinks 8.433        
cufflinks 9.852        
cufflinks 7.91        
cufflinks 9.114        
cufflinks 9.206        
cufflinks 11.351     High High

0 Strain