Gene : Bradi3g58580 B. distachyon v3.1
Defline:  (1 of 3) PF04791 - LMBR1-like membrane protein (LMBR1) Genomic Order:  7262
Name:  ? Bradi3g58580 Secondary Identifier:  ? PAC:32821960
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g58580 0.5kb upstream 0.5kb upstream 7713 true Bd3: 57813110-57820822 Brachypodium distachyon
Bradi3g58580 0.5kb upstream 0.5kb upstream 500 false Bd3: 57820323-57820822 Brachypodium distachyon
Bradi3g58580 0.5kb downstream 0.5kb downstream 7713 true Bd3: 57812610-57820322 Brachypodium distachyon
Bradi3g58580 0.5kb downstream 0.5kb downstream 500 false Bd3: 57812610-57813109 Brachypodium distachyon
Bradi3g58580 1.0kb upstream 1.0kb upstream 8213 true Bd3: 57813110-57821322 Brachypodium distachyon
Bradi3g58580 1.0kb upstream 1.0kb upstream 1000 false Bd3: 57820323-57821322 Brachypodium distachyon
Bradi3g58580 1.0kb downstream 1.0kb downstream 8213 true Bd3: 57812110-57820322 Brachypodium distachyon
Bradi3g58580 1.0kb downstream 1.0kb downstream 1000 false Bd3: 57812110-57813109 Brachypodium distachyon
Bradi3g58580 2.0kb upstream 2.0kb upstream 9213 true Bd3: 57813110-57822322 Brachypodium distachyon
Bradi3g58580 2.0kb upstream 2.0kb upstream 2000 false Bd3: 57820323-57822322 Brachypodium distachyon
Bradi3g58580 2.0kb downstream 2.0kb downstream 9213 true Bd3: 57811110-57820322 Brachypodium distachyon
Bradi3g58580 2.0kb downstream 2.0kb downstream 2000 false Bd3: 57811110-57813109 Brachypodium distachyon
Bradi3g58580 5.0kb upstream 5.0kb upstream 12213 true Bd3: 57813110-57825322 Brachypodium distachyon
Bradi3g58580 5.0kb upstream 5.0kb upstream 5000 false Bd3: 57820323-57825322 Brachypodium distachyon
Bradi3g58580 5.0kb downstream 5.0kb downstream 12213 true Bd3: 57808110-57820322 Brachypodium distachyon
Bradi3g58580 5.0kb downstream 5.0kb downstream 5000 false Bd3: 57808110-57813109 Brachypodium distachyon
Bradi3g58580 10.0kb upstream 10.0kb upstream 17213 true Bd3: 57813110-57830322 Brachypodium distachyon
Bradi3g58580 10.0kb upstream 10.0kb upstream 10000 false Bd3: 57820323-57830322 Brachypodium distachyon
Bradi3g58580 10.0kb downstream 10.0kb downstream 17213 true Bd3: 57803110-57820322 Brachypodium distachyon
Bradi3g58580 10.0kb downstream 10.0kb downstream 10000 false Bd3: 57803110-57813109 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578586 5269 Grass View MSA
122043749 5273 Angiosperm View MSA
121346120 5274 Embryophyte View MSA
123425964 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.552        
cufflinks 3.484        
cufflinks 3.69        
cufflinks 2.902        
cufflinks 2.965        
cufflinks 3.426        
cufflinks 2.883        
cufflinks 3.466        
cufflinks 3.582        
cufflinks 2.237       Low
cufflinks 3.268        
cufflinks 3.998        
cufflinks 3.007        
cufflinks 2.718        
cufflinks 4.397        
cufflinks 3.789        
cufflinks 3.21        
cufflinks 6.661       High
cufflinks 3.53        
cufflinks 1.432       Low
cufflinks 4.16        
cufflinks 3.995        
cufflinks 3.574        
cufflinks 3.685        
cufflinks 3.162        
cufflinks 3.33        
cufflinks 3.882        
cufflinks 3.357        
cufflinks 3.444        
cufflinks 4.902       High

0 Strain