Gene : Bradi3g58280 B. distachyon v3.1
Defline:  (1 of 96) PTHR24078 - DNAJ HOMOLOG SUBFAMILY C MEMBER Genomic Order:  7247
Name:  ? Bradi3g58280 Secondary Identifier:  ? PAC:32822013
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g58280 0.5kb upstream 0.5kb upstream 3801 true Bd3: 57610527-57614327 Brachypodium distachyon
Bradi3g58280 0.5kb upstream 0.5kb upstream 500 false Bd3: 57610527-57611026 Brachypodium distachyon
Bradi3g58280 0.5kb downstream 0.5kb downstream 3801 true Bd3: 57611027-57614827 Brachypodium distachyon
Bradi3g58280 0.5kb downstream 0.5kb downstream 500 false Bd3: 57614328-57614827 Brachypodium distachyon
Bradi3g58280 1.0kb upstream 1.0kb upstream 4301 true Bd3: 57610027-57614327 Brachypodium distachyon
Bradi3g58280 1.0kb upstream 1.0kb upstream 1000 false Bd3: 57610027-57611026 Brachypodium distachyon
Bradi3g58280 1.0kb downstream 1.0kb downstream 4301 true Bd3: 57611027-57615327 Brachypodium distachyon
Bradi3g58280 1.0kb downstream 1.0kb downstream 1000 false Bd3: 57614328-57615327 Brachypodium distachyon
Bradi3g58280 2.0kb upstream 2.0kb upstream 5301 true Bd3: 57609027-57614327 Brachypodium distachyon
Bradi3g58280 2.0kb upstream 2.0kb upstream 2000 false Bd3: 57609027-57611026 Brachypodium distachyon
Bradi3g58280 2.0kb downstream 2.0kb downstream 5301 true Bd3: 57611027-57616327 Brachypodium distachyon
Bradi3g58280 2.0kb downstream 2.0kb downstream 2000 false Bd3: 57614328-57616327 Brachypodium distachyon
Bradi3g58280 5.0kb upstream 5.0kb upstream 8301 true Bd3: 57606027-57614327 Brachypodium distachyon
Bradi3g58280 5.0kb upstream 5.0kb upstream 5000 false Bd3: 57606027-57611026 Brachypodium distachyon
Bradi3g58280 5.0kb downstream 5.0kb downstream 8301 true Bd3: 57611027-57619327 Brachypodium distachyon
Bradi3g58280 5.0kb downstream 5.0kb downstream 5000 false Bd3: 57614328-57619327 Brachypodium distachyon
Bradi3g58280 10.0kb upstream 10.0kb upstream 13301 true Bd3: 57601027-57614327 Brachypodium distachyon
Bradi3g58280 10.0kb upstream 10.0kb upstream 10000 false Bd3: 57601027-57611026 Brachypodium distachyon
Bradi3g58280 10.0kb downstream 10.0kb downstream 13301 true Bd3: 57611027-57624327 Brachypodium distachyon
Bradi3g58280 10.0kb downstream 10.0kb downstream 10000 false Bd3: 57614328-57624327 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569374 5269 Grass View MSA
122050043 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121349167 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.441        
cufflinks 2.987        
cufflinks 2.3       Low
cufflinks 2.899        
cufflinks 6.031        
cufflinks 3.909        
cufflinks 3.94        
cufflinks 7.393       High
cufflinks 4.252        
cufflinks 5.29        
cufflinks 6.786       High
cufflinks 5.38        
cufflinks 5.526        
cufflinks 7.187       High
cufflinks 7.753       High
cufflinks 3.636        
cufflinks 5.372        
cufflinks 2.189       Low
cufflinks 3.022        
cufflinks 5.333        
cufflinks 3.932        
cufflinks 3.051        
cufflinks 7.363       High
cufflinks 4.647        
cufflinks 5.557        
cufflinks 3.267        
cufflinks 5.421        
cufflinks 3.231        
cufflinks 3.21        
cufflinks 2.695       Low

0 Strain