Gene : Bradi3g59050 B. distachyon v3.1
Defline:  (1 of 2) K01834 - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (PGAM, gpmA) Genomic Order:  7314
Name:  ? Bradi3g59050 Secondary Identifier:  ? PAC:32822595
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon ANAEROFRUCAT-PWY Brachypodium distachyon pathologic  
Bdistachyon ANAGLYCOLYSIS-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g59050 0.5kb upstream 0.5kb upstream 3870 true Bd3: 58089295-58093164 Brachypodium distachyon
Bradi3g59050 0.5kb upstream 0.5kb upstream 500 false Bd3: 58092665-58093164 Brachypodium distachyon
Bradi3g59050 0.5kb downstream 0.5kb downstream 3870 true Bd3: 58088795-58092664 Brachypodium distachyon
Bradi3g59050 0.5kb downstream 0.5kb downstream 500 false Bd3: 58088795-58089294 Brachypodium distachyon
Bradi3g59050 1.0kb upstream 1.0kb upstream 4370 true Bd3: 58089295-58093664 Brachypodium distachyon
Bradi3g59050 1.0kb upstream 1.0kb upstream 1000 false Bd3: 58092665-58093664 Brachypodium distachyon
Bradi3g59050 1.0kb downstream 1.0kb downstream 4370 true Bd3: 58088295-58092664 Brachypodium distachyon
Bradi3g59050 1.0kb downstream 1.0kb downstream 1000 false Bd3: 58088295-58089294 Brachypodium distachyon
Bradi3g59050 2.0kb upstream 2.0kb upstream 5370 true Bd3: 58089295-58094664 Brachypodium distachyon
Bradi3g59050 2.0kb upstream 2.0kb upstream 2000 false Bd3: 58092665-58094664 Brachypodium distachyon
Bradi3g59050 2.0kb downstream 2.0kb downstream 5370 true Bd3: 58087295-58092664 Brachypodium distachyon
Bradi3g59050 2.0kb downstream 2.0kb downstream 2000 false Bd3: 58087295-58089294 Brachypodium distachyon
Bradi3g59050 5.0kb upstream 5.0kb upstream 8370 true Bd3: 58089295-58097664 Brachypodium distachyon
Bradi3g59050 5.0kb upstream 5.0kb upstream 5000 false Bd3: 58092665-58097664 Brachypodium distachyon
Bradi3g59050 5.0kb downstream 5.0kb downstream 8370 true Bd3: 58084295-58092664 Brachypodium distachyon
Bradi3g59050 5.0kb downstream 5.0kb downstream 5000 false Bd3: 58084295-58089294 Brachypodium distachyon
Bradi3g59050 10.0kb upstream 10.0kb upstream 13370 true Bd3: 58089295-58102664 Brachypodium distachyon
Bradi3g59050 10.0kb upstream 10.0kb upstream 10000 false Bd3: 58092665-58102664 Brachypodium distachyon
Bradi3g59050 10.0kb downstream 10.0kb downstream 13370 true Bd3: 58079295-58092664 Brachypodium distachyon
Bradi3g59050 10.0kb downstream 10.0kb downstream 10000 false Bd3: 58079295-58089294 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571334 5269 Grass View MSA
122042134 5273 Angiosperm View MSA
121349250 5274 Embryophyte View MSA
123428363 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.047        
cufflinks 6.713        
cufflinks 5.89        
cufflinks 7.679        
cufflinks 20.443     High High
cufflinks 6.246        
cufflinks 5.751       Low
cufflinks 10.63     High High
cufflinks 8.821        
cufflinks 6.264        
cufflinks 7.285        
cufflinks 7.451        
cufflinks 6.676        
cufflinks 6.965        
cufflinks 10.157     High  
cufflinks 6.066        
cufflinks 8.921        
cufflinks 9.889        
cufflinks 8.565        
cufflinks 10.612       High
cufflinks 7.844        
cufflinks 6.828        
cufflinks 10.582     High High
cufflinks 8.291        
cufflinks 6.328        
cufflinks 5.756       Low
cufflinks 8.357        
cufflinks 5.979        
cufflinks 6.181        
cufflinks 5.994        

0 Strain