Gene : Bradi3g59247 B. distachyon v3.1
Defline:  (1 of 1) PTHR23074:SF95 - AAA-TYPE ATPASE DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  7338
Name:  ? Bradi3g59247 Secondary Identifier:  ? PAC:32821862
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g59247 0.5kb upstream 0.5kb upstream 13871 true Bd3: 58230399-58244269 Brachypodium distachyon
Bradi3g59247 0.5kb upstream 0.5kb upstream 500 false Bd3: 58243770-58244269 Brachypodium distachyon
Bradi3g59247 0.5kb downstream 0.5kb downstream 13871 true Bd3: 58229899-58243769 Brachypodium distachyon
Bradi3g59247 0.5kb downstream 0.5kb downstream 500 false Bd3: 58229899-58230398 Brachypodium distachyon
Bradi3g59247 1.0kb upstream 1.0kb upstream 14371 true Bd3: 58230399-58244769 Brachypodium distachyon
Bradi3g59247 1.0kb upstream 1.0kb upstream 1000 false Bd3: 58243770-58244769 Brachypodium distachyon
Bradi3g59247 1.0kb downstream 1.0kb downstream 14371 true Bd3: 58229399-58243769 Brachypodium distachyon
Bradi3g59247 1.0kb downstream 1.0kb downstream 1000 false Bd3: 58229399-58230398 Brachypodium distachyon
Bradi3g59247 2.0kb upstream 2.0kb upstream 15371 true Bd3: 58230399-58245769 Brachypodium distachyon
Bradi3g59247 2.0kb upstream 2.0kb upstream 2000 false Bd3: 58243770-58245769 Brachypodium distachyon
Bradi3g59247 2.0kb downstream 2.0kb downstream 15371 true Bd3: 58228399-58243769 Brachypodium distachyon
Bradi3g59247 2.0kb downstream 2.0kb downstream 2000 false Bd3: 58228399-58230398 Brachypodium distachyon
Bradi3g59247 5.0kb upstream 5.0kb upstream 18371 true Bd3: 58230399-58248769 Brachypodium distachyon
Bradi3g59247 5.0kb upstream 5.0kb upstream 5000 false Bd3: 58243770-58248769 Brachypodium distachyon
Bradi3g59247 5.0kb downstream 5.0kb downstream 18371 true Bd3: 58225399-58243769 Brachypodium distachyon
Bradi3g59247 5.0kb downstream 5.0kb downstream 5000 false Bd3: 58225399-58230398 Brachypodium distachyon
Bradi3g59247 10.0kb upstream 10.0kb upstream 23371 true Bd3: 58230399-58253769 Brachypodium distachyon
Bradi3g59247 10.0kb upstream 10.0kb upstream 10000 false Bd3: 58243770-58253769 Brachypodium distachyon
Bradi3g59247 10.0kb downstream 10.0kb downstream 23371 true Bd3: 58220399-58243769 Brachypodium distachyon
Bradi3g59247 10.0kb downstream 10.0kb downstream 10000 false Bd3: 58220399-58230398 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571183 5269 Grass View MSA
122044741 5273 Angiosperm View MSA
121348057 5274 Embryophyte View MSA
123380716 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.126        
cufflinks 1.867       High
cufflinks 1.917       High
cufflinks 1.413        
cufflinks 0.492       Low
cufflinks 1.691        
cufflinks 1.522        
cufflinks 1.329        
cufflinks 1.52        
cufflinks 1.11        
cufflinks 1.265        
cufflinks 1.6        
cufflinks 0.928        
cufflinks 0.892        
cufflinks 0.81        
cufflinks 1.921       High
cufflinks 0.656        
cufflinks 1.195        
cufflinks 0.548       Low
cufflinks 0.326       Low
cufflinks 0.517       Low
cufflinks 2.073       High
cufflinks 1.243        
cufflinks 1.271        
cufflinks 1.444        
cufflinks 1.614        
cufflinks 0.9        
cufflinks 1.499        
cufflinks 1.688        
cufflinks 1.358        

0 Strain