Gene : Bradi3g59640 B. distachyon v3.1
Defline:  (1 of 1) K10084 - ER degradation enhancer, mannosidase alpha-like 1 (EDEM1) Genomic Order:  7380
Name:  ? Bradi3g59640 Secondary Identifier:  ? PAC:32821178
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g59640 0.5kb upstream 0.5kb upstream 5652 true Bd3: 58525446-58531097 Brachypodium distachyon
Bradi3g59640 0.5kb upstream 0.5kb upstream 500 false Bd3: 58530598-58531097 Brachypodium distachyon
Bradi3g59640 0.5kb downstream 0.5kb downstream 5652 true Bd3: 58524946-58530597 Brachypodium distachyon
Bradi3g59640 0.5kb downstream 0.5kb downstream 500 false Bd3: 58524946-58525445 Brachypodium distachyon
Bradi3g59640 1.0kb upstream 1.0kb upstream 6152 true Bd3: 58525446-58531597 Brachypodium distachyon
Bradi3g59640 1.0kb upstream 1.0kb upstream 1000 false Bd3: 58530598-58531597 Brachypodium distachyon
Bradi3g59640 1.0kb downstream 1.0kb downstream 6152 true Bd3: 58524446-58530597 Brachypodium distachyon
Bradi3g59640 1.0kb downstream 1.0kb downstream 1000 false Bd3: 58524446-58525445 Brachypodium distachyon
Bradi3g59640 2.0kb upstream 2.0kb upstream 7152 true Bd3: 58525446-58532597 Brachypodium distachyon
Bradi3g59640 2.0kb upstream 2.0kb upstream 2000 false Bd3: 58530598-58532597 Brachypodium distachyon
Bradi3g59640 2.0kb downstream 2.0kb downstream 7152 true Bd3: 58523446-58530597 Brachypodium distachyon
Bradi3g59640 2.0kb downstream 2.0kb downstream 2000 false Bd3: 58523446-58525445 Brachypodium distachyon
Bradi3g59640 5.0kb upstream 5.0kb upstream 10152 true Bd3: 58525446-58535597 Brachypodium distachyon
Bradi3g59640 5.0kb upstream 5.0kb upstream 5000 false Bd3: 58530598-58535597 Brachypodium distachyon
Bradi3g59640 5.0kb downstream 5.0kb downstream 10152 true Bd3: 58520446-58530597 Brachypodium distachyon
Bradi3g59640 5.0kb downstream 5.0kb downstream 5000 false Bd3: 58520446-58525445 Brachypodium distachyon
Bradi3g59640 10.0kb upstream 10.0kb upstream 15152 true Bd3: 58525446-58540597 Brachypodium distachyon
Bradi3g59640 10.0kb upstream 10.0kb upstream 10000 false Bd3: 58530598-58540597 Brachypodium distachyon
Bradi3g59640 10.0kb downstream 10.0kb downstream 15152 true Bd3: 58515446-58530597 Brachypodium distachyon
Bradi3g59640 10.0kb downstream 10.0kb downstream 10000 false Bd3: 58515446-58525445 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570102 5269 Grass View MSA
122042500 5273 Angiosperm View MSA
121309980 5274 Embryophyte View MSA
123426913 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.553        
cufflinks 2.853        
cufflinks 2.93        
cufflinks 2.735        
cufflinks 0.876       Low
cufflinks 2.312        
cufflinks 2.336        
cufflinks 1.815        
cufflinks 2.18        
cufflinks 2.17        
cufflinks 1.535        
cufflinks 2.084        
cufflinks 1.383        
cufflinks 1.377        
cufflinks 1.228        
cufflinks 2.583        
cufflinks 1.456        
cufflinks 2.925        
cufflinks 1.568        
cufflinks 0.412       Low
cufflinks 1.832        
cufflinks 2.62        
cufflinks 1.771        
cufflinks 2.068        
cufflinks 2.265        
cufflinks 3.173       High
cufflinks 1.67        
cufflinks 2.739        
cufflinks 2.487        
cufflinks 2.237        

0 Strain