Gene : Bradi3g55890 B. distachyon v3.1
Defline:  (1 of 1) PTHR11746//PTHR11746:SF90 - O-METHYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  6949
Name:  ? Bradi3g55890 Secondary Identifier:  ? PAC:32822586
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g55890 0.5kb upstream 0.5kb upstream 3402 true Bd3: 55718751-55722152 Brachypodium distachyon
Bradi3g55890 0.5kb upstream 0.5kb upstream 500 false Bd3: 55718751-55719250 Brachypodium distachyon
Bradi3g55890 0.5kb downstream 0.5kb downstream 3402 true Bd3: 55719251-55722652 Brachypodium distachyon
Bradi3g55890 0.5kb downstream 0.5kb downstream 500 false Bd3: 55722153-55722652 Brachypodium distachyon
Bradi3g55890 1.0kb upstream 1.0kb upstream 3902 true Bd3: 55718251-55722152 Brachypodium distachyon
Bradi3g55890 1.0kb upstream 1.0kb upstream 1000 false Bd3: 55718251-55719250 Brachypodium distachyon
Bradi3g55890 1.0kb downstream 1.0kb downstream 3902 true Bd3: 55719251-55723152 Brachypodium distachyon
Bradi3g55890 1.0kb downstream 1.0kb downstream 1000 false Bd3: 55722153-55723152 Brachypodium distachyon
Bradi3g55890 2.0kb upstream 2.0kb upstream 4902 true Bd3: 55717251-55722152 Brachypodium distachyon
Bradi3g55890 2.0kb upstream 2.0kb upstream 2000 false Bd3: 55717251-55719250 Brachypodium distachyon
Bradi3g55890 2.0kb downstream 2.0kb downstream 4902 true Bd3: 55719251-55724152 Brachypodium distachyon
Bradi3g55890 2.0kb downstream 2.0kb downstream 2000 false Bd3: 55722153-55724152 Brachypodium distachyon
Bradi3g55890 5.0kb upstream 5.0kb upstream 7902 true Bd3: 55714251-55722152 Brachypodium distachyon
Bradi3g55890 5.0kb upstream 5.0kb upstream 5000 false Bd3: 55714251-55719250 Brachypodium distachyon
Bradi3g55890 5.0kb downstream 5.0kb downstream 7902 true Bd3: 55719251-55727152 Brachypodium distachyon
Bradi3g55890 5.0kb downstream 5.0kb downstream 5000 false Bd3: 55722153-55727152 Brachypodium distachyon
Bradi3g55890 10.0kb upstream 10.0kb upstream 12902 true Bd3: 55709251-55722152 Brachypodium distachyon
Bradi3g55890 10.0kb upstream 10.0kb upstream 10000 false Bd3: 55709251-55719250 Brachypodium distachyon
Bradi3g55890 10.0kb downstream 10.0kb downstream 12902 true Bd3: 55719251-55732152 Brachypodium distachyon
Bradi3g55890 10.0kb downstream 10.0kb downstream 10000 false Bd3: 55722153-55732152 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579108 5269 Grass View MSA
122042759 5273 Angiosperm View MSA
123429068 5275 Viridiplantae View MSA
121310018 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.498     High  
cufflinks 4.696       Low
cufflinks 5.893        
cufflinks 10.113        
cufflinks 24.966     High  
cufflinks 16.082     High  
cufflinks 10.5     High  
cufflinks 43.011     High  
cufflinks 30.689     High  
cufflinks 82.253     High High
cufflinks 25.974     High  
cufflinks 16.362     High  
cufflinks 30.189     High  
cufflinks 34.07     High  
cufflinks 29.742     High  
cufflinks 12.971     High  
cufflinks 35.889     High  
cufflinks 0.573       Low
cufflinks 21.834     High  
cufflinks 22.605     High  
cufflinks 7.274        
cufflinks 30.961     High  
cufflinks 50.202     High High
cufflinks 31.955     High  
cufflinks 24.89     High  
cufflinks 7.754        
cufflinks 22.773     High  
cufflinks 19.245     High  
cufflinks 43.881     High  
cufflinks 8.518        

0 Strain