Gene : Bradi3g56410 B. distachyon v3.1
Defline:  (1 of 1) 2.1.1.221 - tRNA (guanine(9)-N(1))-methyltransferase / tRNA m(1)G(9)-methyltransferase Genomic Order:  7012
Name:  ? Bradi3g56410 Secondary Identifier:  ? PAC:32816612
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g56410 0.5kb upstream 0.5kb upstream 3403 true Bd3: 56071750-56075152 Brachypodium distachyon
Bradi3g56410 0.5kb upstream 0.5kb upstream 500 false Bd3: 56074653-56075152 Brachypodium distachyon
Bradi3g56410 0.5kb downstream 0.5kb downstream 3403 true Bd3: 56071250-56074652 Brachypodium distachyon
Bradi3g56410 0.5kb downstream 0.5kb downstream 500 false Bd3: 56071250-56071749 Brachypodium distachyon
Bradi3g56410 1.0kb upstream 1.0kb upstream 3903 true Bd3: 56071750-56075652 Brachypodium distachyon
Bradi3g56410 1.0kb upstream 1.0kb upstream 1000 false Bd3: 56074653-56075652 Brachypodium distachyon
Bradi3g56410 1.0kb downstream 1.0kb downstream 3903 true Bd3: 56070750-56074652 Brachypodium distachyon
Bradi3g56410 1.0kb downstream 1.0kb downstream 1000 false Bd3: 56070750-56071749 Brachypodium distachyon
Bradi3g56410 2.0kb upstream 2.0kb upstream 4903 true Bd3: 56071750-56076652 Brachypodium distachyon
Bradi3g56410 2.0kb upstream 2.0kb upstream 2000 false Bd3: 56074653-56076652 Brachypodium distachyon
Bradi3g56410 2.0kb downstream 2.0kb downstream 4903 true Bd3: 56069750-56074652 Brachypodium distachyon
Bradi3g56410 2.0kb downstream 2.0kb downstream 2000 false Bd3: 56069750-56071749 Brachypodium distachyon
Bradi3g56410 5.0kb upstream 5.0kb upstream 7903 true Bd3: 56071750-56079652 Brachypodium distachyon
Bradi3g56410 5.0kb upstream 5.0kb upstream 5000 false Bd3: 56074653-56079652 Brachypodium distachyon
Bradi3g56410 5.0kb downstream 5.0kb downstream 7903 true Bd3: 56066750-56074652 Brachypodium distachyon
Bradi3g56410 5.0kb downstream 5.0kb downstream 5000 false Bd3: 56066750-56071749 Brachypodium distachyon
Bradi3g56410 10.0kb upstream 10.0kb upstream 12903 true Bd3: 56071750-56084652 Brachypodium distachyon
Bradi3g56410 10.0kb upstream 10.0kb upstream 10000 false Bd3: 56074653-56084652 Brachypodium distachyon
Bradi3g56410 10.0kb downstream 10.0kb downstream 12903 true Bd3: 56061750-56074652 Brachypodium distachyon
Bradi3g56410 10.0kb downstream 10.0kb downstream 10000 false Bd3: 56061750-56071749 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573297 5269 Grass View MSA
122046397 5273 Angiosperm View MSA
121347986 5274 Embryophyte View MSA
123427480 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.1        
cufflinks 4.097        
cufflinks 3.17        
cufflinks 4.371        
cufflinks 1.185       Low
cufflinks 3.255        
cufflinks 3.288        
cufflinks 2.438        
cufflinks 3.108        
cufflinks 2.092        
cufflinks 0.98       Low
cufflinks 2.328        
cufflinks 0.698       Low
cufflinks 0.751       Low
cufflinks 1.339        
cufflinks 3.311        
cufflinks 3.655        
cufflinks 6.973       High
cufflinks 3.296        
cufflinks 1.405        
cufflinks 4.883       High
cufflinks 2.592        
cufflinks 2.279        
cufflinks 2.574        
cufflinks 4.225        
cufflinks 2.528        
cufflinks 0.972       Low
cufflinks 2.089        
cufflinks 2.313        
cufflinks 4.14        

0 Strain