Gene : Bradi3g56569 B. distachyon v3.1
Defline:  (1 of 3) PTHR22950//PTHR22950:SF262 - AMINO ACID TRANSPORTER Genomic Order:  7031
Name:  ? Bradi3g56569 Secondary Identifier:  ? PAC:32823175
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g56569 0.5kb upstream 0.5kb upstream 5569 true Bd3: 56170202-56175770 Brachypodium distachyon
Bradi3g56569 0.5kb upstream 0.5kb upstream 500 false Bd3: 56175271-56175770 Brachypodium distachyon
Bradi3g56569 0.5kb downstream 0.5kb downstream 5569 true Bd3: 56169702-56175270 Brachypodium distachyon
Bradi3g56569 0.5kb downstream 0.5kb downstream 500 false Bd3: 56169702-56170201 Brachypodium distachyon
Bradi3g56569 1.0kb upstream 1.0kb upstream 6069 true Bd3: 56170202-56176270 Brachypodium distachyon
Bradi3g56569 1.0kb upstream 1.0kb upstream 1000 false Bd3: 56175271-56176270 Brachypodium distachyon
Bradi3g56569 1.0kb downstream 1.0kb downstream 6069 true Bd3: 56169202-56175270 Brachypodium distachyon
Bradi3g56569 1.0kb downstream 1.0kb downstream 1000 false Bd3: 56169202-56170201 Brachypodium distachyon
Bradi3g56569 2.0kb upstream 2.0kb upstream 7069 true Bd3: 56170202-56177270 Brachypodium distachyon
Bradi3g56569 2.0kb upstream 2.0kb upstream 2000 false Bd3: 56175271-56177270 Brachypodium distachyon
Bradi3g56569 2.0kb downstream 2.0kb downstream 7069 true Bd3: 56168202-56175270 Brachypodium distachyon
Bradi3g56569 2.0kb downstream 2.0kb downstream 2000 false Bd3: 56168202-56170201 Brachypodium distachyon
Bradi3g56569 5.0kb upstream 5.0kb upstream 10069 true Bd3: 56170202-56180270 Brachypodium distachyon
Bradi3g56569 5.0kb upstream 5.0kb upstream 5000 false Bd3: 56175271-56180270 Brachypodium distachyon
Bradi3g56569 5.0kb downstream 5.0kb downstream 10069 true Bd3: 56165202-56175270 Brachypodium distachyon
Bradi3g56569 5.0kb downstream 5.0kb downstream 5000 false Bd3: 56165202-56170201 Brachypodium distachyon
Bradi3g56569 10.0kb upstream 10.0kb upstream 15069 true Bd3: 56170202-56185270 Brachypodium distachyon
Bradi3g56569 10.0kb upstream 10.0kb upstream 10000 false Bd3: 56175271-56185270 Brachypodium distachyon
Bradi3g56569 10.0kb downstream 10.0kb downstream 15069 true Bd3: 56160202-56175270 Brachypodium distachyon
Bradi3g56569 10.0kb downstream 10.0kb downstream 10000 false Bd3: 56160202-56170201 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121996093 5273 Angiosperm View MSA
124590625 5269 Grass View MSA
121266266 5274 Embryophyte View MSA
123304609 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.083        
cufflinks 0.257        
cufflinks 0.102        
cufflinks 0.215        
cufflinks 0.016     Low Low
cufflinks 0.277       High
cufflinks 0.289       High
cufflinks 0.072     Low  
cufflinks 0.174        
cufflinks 0.092     Low  
cufflinks 0.161        
cufflinks 0.1        
cufflinks 0.278       High
cufflinks 0.198        
cufflinks 0.134        
cufflinks 0.117        
cufflinks 0.178        
cufflinks 0.062     Low  
cufflinks 0.066     Low  
cufflinks 0.012     Low Low
cufflinks 0.179        
cufflinks 0.053     Low  
cufflinks 0.074     Low  
cufflinks 0.195        
cufflinks 0.266        
cufflinks 0.082     Low  
cufflinks 0.413       High
cufflinks 0.083     Low  
cufflinks 0.064     Low  
cufflinks 0.105     Low  

0 Strain