Gene : Bradi4g01730 B. distachyon v3.1
Defline:  (1 of 1) PTHR31384//PTHR31384:SF3 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 6 Genomic Order:  190
Name:  ? Bradi4g01730 Secondary Identifier:  ? PAC:32784026
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g01730 0.5kb upstream 0.5kb upstream 7031 true Bd4: 1131198-1138228 Brachypodium distachyon
Bradi4g01730 0.5kb upstream 0.5kb upstream 500 false Bd4: 1131198-1131697 Brachypodium distachyon
Bradi4g01730 0.5kb downstream 0.5kb downstream 7031 true Bd4: 1131698-1138728 Brachypodium distachyon
Bradi4g01730 0.5kb downstream 0.5kb downstream 500 false Bd4: 1138229-1138728 Brachypodium distachyon
Bradi4g01730 1.0kb upstream 1.0kb upstream 7531 true Bd4: 1130698-1138228 Brachypodium distachyon
Bradi4g01730 1.0kb upstream 1.0kb upstream 1000 false Bd4: 1130698-1131697 Brachypodium distachyon
Bradi4g01730 1.0kb downstream 1.0kb downstream 7531 true Bd4: 1131698-1139228 Brachypodium distachyon
Bradi4g01730 1.0kb downstream 1.0kb downstream 1000 false Bd4: 1138229-1139228 Brachypodium distachyon
Bradi4g01730 2.0kb upstream 2.0kb upstream 8531 true Bd4: 1129698-1138228 Brachypodium distachyon
Bradi4g01730 2.0kb upstream 2.0kb upstream 2000 false Bd4: 1129698-1131697 Brachypodium distachyon
Bradi4g01730 2.0kb downstream 2.0kb downstream 8531 true Bd4: 1131698-1140228 Brachypodium distachyon
Bradi4g01730 2.0kb downstream 2.0kb downstream 2000 false Bd4: 1138229-1140228 Brachypodium distachyon
Bradi4g01730 5.0kb upstream 5.0kb upstream 11531 true Bd4: 1126698-1138228 Brachypodium distachyon
Bradi4g01730 5.0kb upstream 5.0kb upstream 5000 false Bd4: 1126698-1131697 Brachypodium distachyon
Bradi4g01730 5.0kb downstream 5.0kb downstream 11531 true Bd4: 1131698-1143228 Brachypodium distachyon
Bradi4g01730 5.0kb downstream 5.0kb downstream 5000 false Bd4: 1138229-1143228 Brachypodium distachyon
Bradi4g01730 10.0kb upstream 10.0kb upstream 16531 true Bd4: 1121698-1138228 Brachypodium distachyon
Bradi4g01730 10.0kb upstream 10.0kb upstream 10000 false Bd4: 1121698-1131697 Brachypodium distachyon
Bradi4g01730 10.0kb downstream 10.0kb downstream 16531 true Bd4: 1131698-1148228 Brachypodium distachyon
Bradi4g01730 10.0kb downstream 10.0kb downstream 10000 false Bd4: 1138229-1148228 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573945 5269 Grass View MSA
122048595 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.352     High  
cufflinks 20.676     High High
cufflinks 20.647     High High
cufflinks 15.189     High  
cufflinks 4.639       Low
cufflinks 17.422     High  
cufflinks 16.868     High  
cufflinks 16.1     High  
cufflinks 18.7     High  
cufflinks 12.107     High  
cufflinks 10.498     High  
cufflinks 15.726     High  
cufflinks 11.696     High  
cufflinks 8.94     High  
cufflinks 7.528        
cufflinks 16.432     High  
cufflinks 10.445        
cufflinks 17.598     High  
cufflinks 12.249        
cufflinks 3.378       Low
cufflinks 17.004     High  
cufflinks 20.045     High  
cufflinks 15.143     High  
cufflinks 13.796     High  
cufflinks 13.636     High  
cufflinks 18.262     High  
cufflinks 11.451     High  
cufflinks 18.237     High  
cufflinks 17.942     High  
cufflinks 16.995     High  

0 Strain