Gene : Bradi4g02010 B. distachyon v3.1
Defline:  (1 of 1) PTHR12210//PTHR12210:SF13 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // CTD SMALL PHOSPHATASE-LIKE PROTEIN 2 Genomic Order:  224
Name:  ? Bradi4g02010 Secondary Identifier:  ? PAC:32785818
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g02010 0.5kb upstream 0.5kb upstream 6660 true Bd4: 1315799-1322458 Brachypodium distachyon
Bradi4g02010 0.5kb upstream 0.5kb upstream 500 false Bd4: 1321959-1322458 Brachypodium distachyon
Bradi4g02010 0.5kb downstream 0.5kb downstream 6660 true Bd4: 1315299-1321958 Brachypodium distachyon
Bradi4g02010 0.5kb downstream 0.5kb downstream 500 false Bd4: 1315299-1315798 Brachypodium distachyon
Bradi4g02010 1.0kb upstream 1.0kb upstream 7160 true Bd4: 1315799-1322958 Brachypodium distachyon
Bradi4g02010 1.0kb upstream 1.0kb upstream 1000 false Bd4: 1321959-1322958 Brachypodium distachyon
Bradi4g02010 1.0kb downstream 1.0kb downstream 7160 true Bd4: 1314799-1321958 Brachypodium distachyon
Bradi4g02010 1.0kb downstream 1.0kb downstream 1000 false Bd4: 1314799-1315798 Brachypodium distachyon
Bradi4g02010 2.0kb upstream 2.0kb upstream 8160 true Bd4: 1315799-1323958 Brachypodium distachyon
Bradi4g02010 2.0kb upstream 2.0kb upstream 2000 false Bd4: 1321959-1323958 Brachypodium distachyon
Bradi4g02010 2.0kb downstream 2.0kb downstream 8160 true Bd4: 1313799-1321958 Brachypodium distachyon
Bradi4g02010 2.0kb downstream 2.0kb downstream 2000 false Bd4: 1313799-1315798 Brachypodium distachyon
Bradi4g02010 5.0kb upstream 5.0kb upstream 11160 true Bd4: 1315799-1326958 Brachypodium distachyon
Bradi4g02010 5.0kb upstream 5.0kb upstream 5000 false Bd4: 1321959-1326958 Brachypodium distachyon
Bradi4g02010 5.0kb downstream 5.0kb downstream 11160 true Bd4: 1310799-1321958 Brachypodium distachyon
Bradi4g02010 5.0kb downstream 5.0kb downstream 5000 false Bd4: 1310799-1315798 Brachypodium distachyon
Bradi4g02010 10.0kb upstream 10.0kb upstream 16160 true Bd4: 1315799-1331958 Brachypodium distachyon
Bradi4g02010 10.0kb upstream 10.0kb upstream 10000 false Bd4: 1321959-1331958 Brachypodium distachyon
Bradi4g02010 10.0kb downstream 10.0kb downstream 16160 true Bd4: 1305799-1321958 Brachypodium distachyon
Bradi4g02010 10.0kb downstream 10.0kb downstream 10000 false Bd4: 1305799-1315798 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585738 5269 Grass View MSA
122048249 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121310904 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.469     High  
cufflinks 12.533     High  
cufflinks 13.177     High  
cufflinks 11.108     High  
cufflinks 8.177        
cufflinks 11.895     High  
cufflinks 12.29     High  
cufflinks 11.297     High  
cufflinks 11.51     High  
cufflinks 9.467        
cufflinks 10.846     High  
cufflinks 11.826     High  
cufflinks 7.87     High Low
cufflinks 8.742     High  
cufflinks 8.46        
cufflinks 11.923     High  
cufflinks 12.414     High  
cufflinks 19.479     High High
cufflinks 15.222     High  
cufflinks 6.326       Low
cufflinks 17.086     High High
cufflinks 12.094     High  
cufflinks 10.876     High  
cufflinks 11.304     High  
cufflinks 12.083     High  
cufflinks 12.437     High  
cufflinks 12.819     High  
cufflinks 11.827     High  
cufflinks 11.511     High  
cufflinks 19.417     High High

0 Strain