Gene : Bradi4g26130 B. distachyon v3.1
Defline:  (1 of 1) PTHR23308//PTHR23308:SF29 - NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 Genomic Order:  3334
Name:  ? Bradi4g26130 Secondary Identifier:  ? PAC:32784836
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g26130 0.5kb upstream 0.5kb upstream 2577 true Bd4: 31345678-31348254 Brachypodium distachyon
Bradi4g26130 0.5kb upstream 0.5kb upstream 500 false Bd4: 31345678-31346177 Brachypodium distachyon
Bradi4g26130 0.5kb downstream 0.5kb downstream 2577 true Bd4: 31346178-31348754 Brachypodium distachyon
Bradi4g26130 0.5kb downstream 0.5kb downstream 500 false Bd4: 31348255-31348754 Brachypodium distachyon
Bradi4g26130 1.0kb upstream 1.0kb upstream 3077 true Bd4: 31345178-31348254 Brachypodium distachyon
Bradi4g26130 1.0kb upstream 1.0kb upstream 1000 false Bd4: 31345178-31346177 Brachypodium distachyon
Bradi4g26130 1.0kb downstream 1.0kb downstream 3077 true Bd4: 31346178-31349254 Brachypodium distachyon
Bradi4g26130 1.0kb downstream 1.0kb downstream 1000 false Bd4: 31348255-31349254 Brachypodium distachyon
Bradi4g26130 2.0kb upstream 2.0kb upstream 4077 true Bd4: 31344178-31348254 Brachypodium distachyon
Bradi4g26130 2.0kb upstream 2.0kb upstream 2000 false Bd4: 31344178-31346177 Brachypodium distachyon
Bradi4g26130 2.0kb downstream 2.0kb downstream 4077 true Bd4: 31346178-31350254 Brachypodium distachyon
Bradi4g26130 2.0kb downstream 2.0kb downstream 2000 false Bd4: 31348255-31350254 Brachypodium distachyon
Bradi4g26130 5.0kb upstream 5.0kb upstream 7077 true Bd4: 31341178-31348254 Brachypodium distachyon
Bradi4g26130 5.0kb upstream 5.0kb upstream 5000 false Bd4: 31341178-31346177 Brachypodium distachyon
Bradi4g26130 5.0kb downstream 5.0kb downstream 7077 true Bd4: 31346178-31353254 Brachypodium distachyon
Bradi4g26130 5.0kb downstream 5.0kb downstream 5000 false Bd4: 31348255-31353254 Brachypodium distachyon
Bradi4g26130 10.0kb upstream 10.0kb upstream 12077 true Bd4: 31336178-31348254 Brachypodium distachyon
Bradi4g26130 10.0kb upstream 10.0kb upstream 10000 false Bd4: 31336178-31346177 Brachypodium distachyon
Bradi4g26130 10.0kb downstream 10.0kb downstream 12077 true Bd4: 31346178-31358254 Brachypodium distachyon
Bradi4g26130 10.0kb downstream 10.0kb downstream 10000 false Bd4: 31348255-31358254 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583819 5269 Grass View MSA
122042553 5273 Angiosperm View MSA
121344574 5274 Embryophyte View MSA
123426095 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.018        
cufflinks 18.239     High  
cufflinks 19.646     High  
cufflinks 28.218     High  
cufflinks 7.19        
cufflinks 14.987     High  
cufflinks 19.448     High  
cufflinks 10.255     High  
cufflinks 14.103     High  
cufflinks 32.096     High  
cufflinks 25.083     High  
cufflinks 9.445     High  
cufflinks 19.392     High  
cufflinks 31.837     High  
cufflinks 8.712     High  
cufflinks 12.414     High  
cufflinks 16.97     High  
cufflinks 0.228       Low
cufflinks 17.227     High  
cufflinks 11.671     High  
cufflinks 11.577     High  
cufflinks 13.79     High  
cufflinks 12.156     High  
cufflinks 13.836     High  
cufflinks 22.864     High  
cufflinks 29.054     High  
cufflinks 26.606     High  
cufflinks 37.354     High  
cufflinks 35.87     High  
cufflinks 5.999        

0 Strain