Gene : Bradi4g01015 B. distachyon v3.1
Defline:  (1 of 5) PTHR32108:SF0 - DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA Genomic Order:  103
Name:  ? Bradi4g01015 Secondary Identifier:  ? PAC:32791234
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g01015 0.5kb upstream 0.5kb upstream 1244 true Bd4: 541441-542684 Brachypodium distachyon
Bradi4g01015 0.5kb upstream 0.5kb upstream 500 false Bd4: 541441-541940 Brachypodium distachyon
Bradi4g01015 0.5kb downstream 0.5kb downstream 1244 true Bd4: 541941-543184 Brachypodium distachyon
Bradi4g01015 0.5kb downstream 0.5kb downstream 500 false Bd4: 542685-543184 Brachypodium distachyon
Bradi4g01015 1.0kb upstream 1.0kb upstream 1744 true Bd4: 540941-542684 Brachypodium distachyon
Bradi4g01015 1.0kb upstream 1.0kb upstream 1000 false Bd4: 540941-541940 Brachypodium distachyon
Bradi4g01015 1.0kb downstream 1.0kb downstream 1744 true Bd4: 541941-543684 Brachypodium distachyon
Bradi4g01015 1.0kb downstream 1.0kb downstream 1000 false Bd4: 542685-543684 Brachypodium distachyon
Bradi4g01015 2.0kb upstream 2.0kb upstream 2744 true Bd4: 539941-542684 Brachypodium distachyon
Bradi4g01015 2.0kb upstream 2.0kb upstream 2000 false Bd4: 539941-541940 Brachypodium distachyon
Bradi4g01015 2.0kb downstream 2.0kb downstream 2744 true Bd4: 541941-544684 Brachypodium distachyon
Bradi4g01015 2.0kb downstream 2.0kb downstream 2000 false Bd4: 542685-544684 Brachypodium distachyon
Bradi4g01015 5.0kb upstream 5.0kb upstream 5744 true Bd4: 536941-542684 Brachypodium distachyon
Bradi4g01015 5.0kb upstream 5.0kb upstream 5000 false Bd4: 536941-541940 Brachypodium distachyon
Bradi4g01015 5.0kb downstream 5.0kb downstream 5744 true Bd4: 541941-547684 Brachypodium distachyon
Bradi4g01015 5.0kb downstream 5.0kb downstream 5000 false Bd4: 542685-547684 Brachypodium distachyon
Bradi4g01015 10.0kb upstream 10.0kb upstream 10744 true Bd4: 531941-542684 Brachypodium distachyon
Bradi4g01015 10.0kb upstream 10.0kb upstream 10000 false Bd4: 531941-541940 Brachypodium distachyon
Bradi4g01015 10.0kb downstream 10.0kb downstream 10744 true Bd4: 541941-552684 Brachypodium distachyon
Bradi4g01015 10.0kb downstream 10.0kb downstream 10000 false Bd4: 542685-552684 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029089 5273 Angiosperm View MSA
124582090 5269 Grass View MSA
121298488 5274 Embryophyte View MSA
123336460 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain