Protein Family : PF01000//PF01193 - RNA polymerase Rpb3/RpoA insert domain (RNA_pol_A_bac) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) 121298488

Method ID:  5274 Method Name:  Embryophyte
Sequence Alignment:  View MSA Member Count:  14

14 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Gorai.010G120000 (1 of 6) PTHR32108:SF0 - DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA G. raimondii v2.1 570   Chr10: 24094854-24095423
Bostr.25219s0178 (1 of 1) PTHR32108:SF0 - DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA B. stricta v1.2 529   Scaffold25219: 832131-832659
Traes_3AL_6008F5D5A (1 of 14) PF01000//PF01193 - RNA polymerase Rpb3/RpoA insert domain (RNA_pol_A_bac) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) T. aestivum v2.2 808   ta_iwgsc_3al_v1_4303431: 1070-1877
Bradi4g01015 (1 of 5) PTHR32108:SF0 - DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA B. distachyon v3.1 744   Bd4: 541941-542684
Aqcoe2G163600 (1 of 1) PTHR32108:SF0 - DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA A. coerulea v3.1 626   Chr_02: 17917554-17918179
Solyc01g017440.1 (1 of 5) PTHR32108:SF0 - DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA S. lycopersicum ITAG2.4 883   SL2.50ch01: 23951086-23951968
Solyc12g035890.1 (1 of 1) PF03118 - Bacterial RNA polymerase, alpha chain C terminal domain (RNA_pol_A_CTD) S. lycopersicum ITAG2.4 1305   SL2.50ch12: 54295965-54297269
PGSC0003DMG400003335 (1 of 2) PTHR32108//PTHR32108:SF0 - FAMILY NOT NAMED // DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA S. tuberosum v4.03 927   ST4.03ch01: 16778050-16778976
PGSC0003DMG400002472 (1 of 2) PTHR32108//PTHR32108:SF0 - FAMILY NOT NAMED // DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA S. tuberosum v4.03 903   ST4.03ch01: 50932429-50933331
Pavir.5KG002400 (1 of 1) K03040 - DNA-directed RNA polymerase subunit alpha (rpoA) P. virgatum v4.1 944   Chr05K: 707226-708169
HanXRQChr11g0321081 (1 of 19) PTHR32108:SF0 - DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA H. annuus r1.2 619   HanXRQChr11: 3817023-3817641
HanXRQChr11g0345261 (1 of 5) PF01000//PF01193 - RNA polymerase Rpb3/RpoA insert domain (RNA_pol_A_bac) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) H. annuus r1.2 651   HanXRQChr11: 137804360-137805010
PhHAL.3G330300 (1 of 1) PF01193//PF03118 - RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) // Bacterial RNA polymerase, alpha chain C terminal domain (RNA_pol_A_CTD) P. hallii HAL v2.1 836   Chr03: 25527022-25527857
OsKitaake09g021000 (1 of 4) PTHR32108:SF0 - DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA O. sativa Kitaake v3.1 805   Chr9: 3947188-3947992

14 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Gorai.010G120000.1 G. raimondii v2.1 121298488 PF01000//PF01193 - RNA polymerase Rpb3/RpoA insert domain (RNA_pol_A_bac) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) 1 5274 Embryophyte
Bostr.25219s0178.1.p B. stricta v1.2 121298488 PF01000//PF01193 - RNA polymerase Rpb3/RpoA insert domain (RNA_pol_A_bac) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) 1 5274 Embryophyte
Traes_3AL_6008F5D5A.1 T. aestivum v2.2 121298488 PF01000//PF01193 - RNA polymerase Rpb3/RpoA insert domain (RNA_pol_A_bac) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) 1 5274 Embryophyte
Bradi4g01015.1.p B. distachyon v3.1 121298488 PF01000//PF01193 - RNA polymerase Rpb3/RpoA insert domain (RNA_pol_A_bac) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) 1 5274 Embryophyte
Aqcoe2G163600.1.p A. coerulea v3.1 121298488 PF01000//PF01193 - RNA polymerase Rpb3/RpoA insert domain (RNA_pol_A_bac) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) 1 5274 Embryophyte
Solyc01g017440.1.1 S. lycopersicum ITAG2.4 121298488 PF01000//PF01193 - RNA polymerase Rpb3/RpoA insert domain (RNA_pol_A_bac) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) 2 5274 Embryophyte
Solyc12g035890.1.1 S. lycopersicum ITAG2.4 121298488 PF01000//PF01193 - RNA polymerase Rpb3/RpoA insert domain (RNA_pol_A_bac) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) 2 5274 Embryophyte
PGSC0003DMP400004369 S. tuberosum v4.03 121298488 PF01000//PF01193 - RNA polymerase Rpb3/RpoA insert domain (RNA_pol_A_bac) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) 2 5274 Embryophyte
PGSC0003DMP400005975 S. tuberosum v4.03 121298488 PF01000//PF01193 - RNA polymerase Rpb3/RpoA insert domain (RNA_pol_A_bac) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) 2 5274 Embryophyte
Pavir.5KG002400.1.p P. virgatum v4.1 121298488 PF01000//PF01193 - RNA polymerase Rpb3/RpoA insert domain (RNA_pol_A_bac) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) 1 5274 Embryophyte
HanXRQChr11g0321081 H. annuus r1.2 121298488 PF01000//PF01193 - RNA polymerase Rpb3/RpoA insert domain (RNA_pol_A_bac) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) 2 5274 Embryophyte
HanXRQChr11g0345261 H. annuus r1.2 121298488 PF01000//PF01193 - RNA polymerase Rpb3/RpoA insert domain (RNA_pol_A_bac) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) 2 5274 Embryophyte
PhHAL.3G330300.1.p P. hallii HAL v2.1 121298488 PF01000//PF01193 - RNA polymerase Rpb3/RpoA insert domain (RNA_pol_A_bac) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) 1 5274 Embryophyte
OsKitaake09g021000.1.p O. sativa Kitaake v3.1 121298488 PF01000//PF01193 - RNA polymerase Rpb3/RpoA insert domain (RNA_pol_A_bac) // RNA polymerase Rpb3/Rpb11 dimerisation domain (RNA_pol_L) 1 5274 Embryophyte