Gene : Bradi4g05670 B. distachyon v3.1
Defline:  (1 of 1) PTHR34203:SF2 - EXPRESSED PROTEIN Genomic Order:  734
Name:  ? Bradi4g05670 Secondary Identifier:  ? PAC:32786783
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g05670 0.5kb upstream 0.5kb upstream 5384 true Bd4: 4739176-4744559 Brachypodium distachyon
Bradi4g05670 0.5kb upstream 0.5kb upstream 500 false Bd4: 4744060-4744559 Brachypodium distachyon
Bradi4g05670 0.5kb downstream 0.5kb downstream 5384 true Bd4: 4738676-4744059 Brachypodium distachyon
Bradi4g05670 0.5kb downstream 0.5kb downstream 500 false Bd4: 4738676-4739175 Brachypodium distachyon
Bradi4g05670 1.0kb upstream 1.0kb upstream 5884 true Bd4: 4739176-4745059 Brachypodium distachyon
Bradi4g05670 1.0kb upstream 1.0kb upstream 1000 false Bd4: 4744060-4745059 Brachypodium distachyon
Bradi4g05670 1.0kb downstream 1.0kb downstream 5884 true Bd4: 4738176-4744059 Brachypodium distachyon
Bradi4g05670 1.0kb downstream 1.0kb downstream 1000 false Bd4: 4738176-4739175 Brachypodium distachyon
Bradi4g05670 2.0kb upstream 2.0kb upstream 6884 true Bd4: 4739176-4746059 Brachypodium distachyon
Bradi4g05670 2.0kb upstream 2.0kb upstream 2000 false Bd4: 4744060-4746059 Brachypodium distachyon
Bradi4g05670 2.0kb downstream 2.0kb downstream 6884 true Bd4: 4737176-4744059 Brachypodium distachyon
Bradi4g05670 2.0kb downstream 2.0kb downstream 2000 false Bd4: 4737176-4739175 Brachypodium distachyon
Bradi4g05670 5.0kb upstream 5.0kb upstream 9884 true Bd4: 4739176-4749059 Brachypodium distachyon
Bradi4g05670 5.0kb upstream 5.0kb upstream 5000 false Bd4: 4744060-4749059 Brachypodium distachyon
Bradi4g05670 5.0kb downstream 5.0kb downstream 9884 true Bd4: 4734176-4744059 Brachypodium distachyon
Bradi4g05670 5.0kb downstream 5.0kb downstream 5000 false Bd4: 4734176-4739175 Brachypodium distachyon
Bradi4g05670 10.0kb upstream 10.0kb upstream 14884 true Bd4: 4739176-4754059 Brachypodium distachyon
Bradi4g05670 10.0kb upstream 10.0kb upstream 10000 false Bd4: 4744060-4754059 Brachypodium distachyon
Bradi4g05670 10.0kb downstream 10.0kb downstream 14884 true Bd4: 4729176-4744059 Brachypodium distachyon
Bradi4g05670 10.0kb downstream 10.0kb downstream 10000 false Bd4: 4729176-4739175 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578656 5269 Grass View MSA
122043086 5273 Angiosperm View MSA
121350667 5274 Embryophyte View MSA
123426731 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.088        
cufflinks 0.808        
cufflinks 0.789        
cufflinks 0.819        
cufflinks 0.487        
cufflinks 0.73        
cufflinks 0.818        
cufflinks 0.734        
cufflinks 0.702        
cufflinks 0.753        
cufflinks 0.244       Low
cufflinks 0.964        
cufflinks 0.21       Low
cufflinks 0.392        
cufflinks 0.868        
cufflinks 1.255        
cufflinks 1.237        
cufflinks 1.584       High
cufflinks 1.158        
cufflinks 0.029     Low Low
cufflinks 1.688       High
cufflinks 0.935        
cufflinks 0.7        
cufflinks 0.67        
cufflinks 0.783        
cufflinks 0.799        
cufflinks 0.284       Low
cufflinks 0.793        
cufflinks 0.669        
cufflinks 1.241        

0 Strain