Gene : Bradi4g05830 B. distachyon v3.1
Defline:  (1 of 1) PTHR31209:SF0 - COFACTOR-INDEPENDENT PHOSPHOGLYCERATE MUTASE Genomic Order:  754
Name:  ? Bradi4g05830 Secondary Identifier:  ? PAC:32786689
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon GLUCONEO-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-1042 Brachypodium distachyon pathologic  
Bdistachyon PWY-5464 Brachypodium distachyon pathologic  
Bdistachyon PWY-5723 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g05830 0.5kb upstream 0.5kb upstream 3701 true Bd4: 4845456-4849156 Brachypodium distachyon
Bradi4g05830 0.5kb upstream 0.5kb upstream 500 false Bd4: 4845456-4845955 Brachypodium distachyon
Bradi4g05830 0.5kb downstream 0.5kb downstream 3701 true Bd4: 4845956-4849656 Brachypodium distachyon
Bradi4g05830 0.5kb downstream 0.5kb downstream 500 false Bd4: 4849157-4849656 Brachypodium distachyon
Bradi4g05830 1.0kb upstream 1.0kb upstream 4201 true Bd4: 4844956-4849156 Brachypodium distachyon
Bradi4g05830 1.0kb upstream 1.0kb upstream 1000 false Bd4: 4844956-4845955 Brachypodium distachyon
Bradi4g05830 1.0kb downstream 1.0kb downstream 4201 true Bd4: 4845956-4850156 Brachypodium distachyon
Bradi4g05830 1.0kb downstream 1.0kb downstream 1000 false Bd4: 4849157-4850156 Brachypodium distachyon
Bradi4g05830 2.0kb upstream 2.0kb upstream 5201 true Bd4: 4843956-4849156 Brachypodium distachyon
Bradi4g05830 2.0kb upstream 2.0kb upstream 2000 false Bd4: 4843956-4845955 Brachypodium distachyon
Bradi4g05830 2.0kb downstream 2.0kb downstream 5201 true Bd4: 4845956-4851156 Brachypodium distachyon
Bradi4g05830 2.0kb downstream 2.0kb downstream 2000 false Bd4: 4849157-4851156 Brachypodium distachyon
Bradi4g05830 5.0kb upstream 5.0kb upstream 8201 true Bd4: 4840956-4849156 Brachypodium distachyon
Bradi4g05830 5.0kb upstream 5.0kb upstream 5000 false Bd4: 4840956-4845955 Brachypodium distachyon
Bradi4g05830 5.0kb downstream 5.0kb downstream 8201 true Bd4: 4845956-4854156 Brachypodium distachyon
Bradi4g05830 5.0kb downstream 5.0kb downstream 5000 false Bd4: 4849157-4854156 Brachypodium distachyon
Bradi4g05830 10.0kb upstream 10.0kb upstream 13201 true Bd4: 4835956-4849156 Brachypodium distachyon
Bradi4g05830 10.0kb upstream 10.0kb upstream 10000 false Bd4: 4835956-4845955 Brachypodium distachyon
Bradi4g05830 10.0kb downstream 10.0kb downstream 13201 true Bd4: 4845956-4859156 Brachypodium distachyon
Bradi4g05830 10.0kb downstream 10.0kb downstream 10000 false Bd4: 4849157-4859156 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574027 5269 Grass View MSA
122046055 5273 Angiosperm View MSA
121343817 5274 Embryophyte View MSA
123428865 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.889     High  
cufflinks 9.946        
cufflinks 11.414     High  
cufflinks 11.457     High  
cufflinks 11.457     High  
cufflinks 9.352        
cufflinks 9.673     High  
cufflinks 9.247     High  
cufflinks 10.062     High  
cufflinks 11.25     High  
cufflinks 8.339       Low
cufflinks 10.334     High  
cufflinks 9.547     High  
cufflinks 9.122     High  
cufflinks 10.176     High  
cufflinks 10.419     High  
cufflinks 11.385     High  
cufflinks 21.622     High High
cufflinks 12.083        
cufflinks 14.579     High High
cufflinks 17.861     High High
cufflinks 10.856     High  
cufflinks 9.035       Low
cufflinks 9.631     High  
cufflinks 9.87     High  
cufflinks 12.736     High  
cufflinks 9.186     High  
cufflinks 13.113     High  
cufflinks 10.643        
cufflinks 12.663     High  

0 Strain