Gene : Bradi4g07940 B. distachyon v3.1
Defline:  (1 of 1) PTHR12817 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6B Genomic Order:  1042
Name:  ? Bradi4g07940 Secondary Identifier:  ? PAC:32785968
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g07940 0.5kb upstream 0.5kb upstream 6951 true Bd4: 6850266-6857216 Brachypodium distachyon
Bradi4g07940 0.5kb upstream 0.5kb upstream 500 false Bd4: 6856717-6857216 Brachypodium distachyon
Bradi4g07940 0.5kb downstream 0.5kb downstream 6951 true Bd4: 6849766-6856716 Brachypodium distachyon
Bradi4g07940 0.5kb downstream 0.5kb downstream 500 false Bd4: 6849766-6850265 Brachypodium distachyon
Bradi4g07940 1.0kb upstream 1.0kb upstream 7451 true Bd4: 6850266-6857716 Brachypodium distachyon
Bradi4g07940 1.0kb upstream 1.0kb upstream 1000 false Bd4: 6856717-6857716 Brachypodium distachyon
Bradi4g07940 1.0kb downstream 1.0kb downstream 7451 true Bd4: 6849266-6856716 Brachypodium distachyon
Bradi4g07940 1.0kb downstream 1.0kb downstream 1000 false Bd4: 6849266-6850265 Brachypodium distachyon
Bradi4g07940 2.0kb upstream 2.0kb upstream 8451 true Bd4: 6850266-6858716 Brachypodium distachyon
Bradi4g07940 2.0kb upstream 2.0kb upstream 2000 false Bd4: 6856717-6858716 Brachypodium distachyon
Bradi4g07940 2.0kb downstream 2.0kb downstream 8451 true Bd4: 6848266-6856716 Brachypodium distachyon
Bradi4g07940 2.0kb downstream 2.0kb downstream 2000 false Bd4: 6848266-6850265 Brachypodium distachyon
Bradi4g07940 5.0kb upstream 5.0kb upstream 11451 true Bd4: 6850266-6861716 Brachypodium distachyon
Bradi4g07940 5.0kb upstream 5.0kb upstream 5000 false Bd4: 6856717-6861716 Brachypodium distachyon
Bradi4g07940 5.0kb downstream 5.0kb downstream 11451 true Bd4: 6845266-6856716 Brachypodium distachyon
Bradi4g07940 5.0kb downstream 5.0kb downstream 5000 false Bd4: 6845266-6850265 Brachypodium distachyon
Bradi4g07940 10.0kb upstream 10.0kb upstream 16451 true Bd4: 6850266-6866716 Brachypodium distachyon
Bradi4g07940 10.0kb upstream 10.0kb upstream 10000 false Bd4: 6856717-6866716 Brachypodium distachyon
Bradi4g07940 10.0kb downstream 10.0kb downstream 16451 true Bd4: 6840266-6856716 Brachypodium distachyon
Bradi4g07940 10.0kb downstream 10.0kb downstream 10000 false Bd4: 6840266-6850265 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569830 5269 Grass View MSA
122041714 5273 Angiosperm View MSA
123428891 5275 Viridiplantae View MSA
121346428 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.632        
cufflinks 3.822        
cufflinks 4.225        
cufflinks 6.13        
cufflinks 5.304        
cufflinks 3.418        
cufflinks 3.498        
cufflinks 3.255        
cufflinks 3.539        
cufflinks 5.362        
cufflinks 1.454       Low
cufflinks 3.416        
cufflinks 1.133       Low
cufflinks 1.558       Low
cufflinks 3.867        
cufflinks 3.132        
cufflinks 5.423        
cufflinks 5.064        
cufflinks 4.779        
cufflinks 3.097        
cufflinks 8.692       High
cufflinks 3.16        
cufflinks 3.324        
cufflinks 3.523        
cufflinks 4.454        
cufflinks 7.006       High
cufflinks 1.491       Low
cufflinks 5.194        
cufflinks 4.107        
cufflinks 8.728       High

0 Strain