Gene : Bradi4g24310 B. distachyon v3.1
Defline:  (1 of 1) PTHR31580:SF2 - FILAMENT-LIKE PLANT PROTEIN 1-RELATED Genomic Order:  3094
Name:  ? Bradi4g24310 Secondary Identifier:  ? PAC:32785585
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g24310 0.5kb upstream 0.5kb upstream 7280 true Bd4: 29347099-29354378 Brachypodium distachyon
Bradi4g24310 0.5kb upstream 0.5kb upstream 500 false Bd4: 29353879-29354378 Brachypodium distachyon
Bradi4g24310 0.5kb downstream 0.5kb downstream 7280 true Bd4: 29346599-29353878 Brachypodium distachyon
Bradi4g24310 0.5kb downstream 0.5kb downstream 500 false Bd4: 29346599-29347098 Brachypodium distachyon
Bradi4g24310 1.0kb upstream 1.0kb upstream 7780 true Bd4: 29347099-29354878 Brachypodium distachyon
Bradi4g24310 1.0kb upstream 1.0kb upstream 1000 false Bd4: 29353879-29354878 Brachypodium distachyon
Bradi4g24310 1.0kb downstream 1.0kb downstream 7780 true Bd4: 29346099-29353878 Brachypodium distachyon
Bradi4g24310 1.0kb downstream 1.0kb downstream 1000 false Bd4: 29346099-29347098 Brachypodium distachyon
Bradi4g24310 2.0kb upstream 2.0kb upstream 8780 true Bd4: 29347099-29355878 Brachypodium distachyon
Bradi4g24310 2.0kb upstream 2.0kb upstream 2000 false Bd4: 29353879-29355878 Brachypodium distachyon
Bradi4g24310 2.0kb downstream 2.0kb downstream 8780 true Bd4: 29345099-29353878 Brachypodium distachyon
Bradi4g24310 2.0kb downstream 2.0kb downstream 2000 false Bd4: 29345099-29347098 Brachypodium distachyon
Bradi4g24310 5.0kb upstream 5.0kb upstream 11780 true Bd4: 29347099-29358878 Brachypodium distachyon
Bradi4g24310 5.0kb upstream 5.0kb upstream 5000 false Bd4: 29353879-29358878 Brachypodium distachyon
Bradi4g24310 5.0kb downstream 5.0kb downstream 11780 true Bd4: 29342099-29353878 Brachypodium distachyon
Bradi4g24310 5.0kb downstream 5.0kb downstream 5000 false Bd4: 29342099-29347098 Brachypodium distachyon
Bradi4g24310 10.0kb upstream 10.0kb upstream 16780 true Bd4: 29347099-29363878 Brachypodium distachyon
Bradi4g24310 10.0kb upstream 10.0kb upstream 10000 false Bd4: 29353879-29363878 Brachypodium distachyon
Bradi4g24310 10.0kb downstream 10.0kb downstream 16780 true Bd4: 29337099-29353878 Brachypodium distachyon
Bradi4g24310 10.0kb downstream 10.0kb downstream 10000 false Bd4: 29337099-29347098 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569307 5269 Grass View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.701        
cufflinks 1.572        
cufflinks 2.069        
cufflinks 1.106        
cufflinks 0.643        
cufflinks 1.316        
cufflinks 1.291        
cufflinks 0.933        
cufflinks 1.291        
cufflinks 0.936        
cufflinks 0.106       Low
cufflinks 1.646        
cufflinks 0.603        
cufflinks 0.1       Low
cufflinks 0.705        
cufflinks 1.44        
cufflinks 0.9        
cufflinks 4.236       High
cufflinks 0.97        
cufflinks 0.494        
cufflinks 3.386       High
cufflinks 1.828        
cufflinks 0.969        
cufflinks 1.003        
cufflinks 1.1        
cufflinks 1.478        
cufflinks 0.167       Low
cufflinks 1.345        
cufflinks 1.482        
cufflinks 3.332       High

0 Strain