Gene : Bradi4g12060 B. distachyon v3.1
Defline:  (1 of 1) PTHR15651:SF7 - ARMADILLO REPEAT-CONTAINING PROTEIN 8 Genomic Order:  1643
Name:  ? Bradi4g12060 Secondary Identifier:  ? PAC:32784499
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g12060 0.5kb upstream 0.5kb upstream 7074 true Bd4: 12006333-12013406 Brachypodium distachyon
Bradi4g12060 0.5kb upstream 0.5kb upstream 500 false Bd4: 12006333-12006832 Brachypodium distachyon
Bradi4g12060 0.5kb downstream 0.5kb downstream 7074 true Bd4: 12006833-12013906 Brachypodium distachyon
Bradi4g12060 0.5kb downstream 0.5kb downstream 500 false Bd4: 12013407-12013906 Brachypodium distachyon
Bradi4g12060 1.0kb upstream 1.0kb upstream 7574 true Bd4: 12005833-12013406 Brachypodium distachyon
Bradi4g12060 1.0kb upstream 1.0kb upstream 1000 false Bd4: 12005833-12006832 Brachypodium distachyon
Bradi4g12060 1.0kb downstream 1.0kb downstream 7574 true Bd4: 12006833-12014406 Brachypodium distachyon
Bradi4g12060 1.0kb downstream 1.0kb downstream 1000 false Bd4: 12013407-12014406 Brachypodium distachyon
Bradi4g12060 2.0kb upstream 2.0kb upstream 8574 true Bd4: 12004833-12013406 Brachypodium distachyon
Bradi4g12060 2.0kb upstream 2.0kb upstream 2000 false Bd4: 12004833-12006832 Brachypodium distachyon
Bradi4g12060 2.0kb downstream 2.0kb downstream 8574 true Bd4: 12006833-12015406 Brachypodium distachyon
Bradi4g12060 2.0kb downstream 2.0kb downstream 2000 false Bd4: 12013407-12015406 Brachypodium distachyon
Bradi4g12060 5.0kb upstream 5.0kb upstream 11574 true Bd4: 12001833-12013406 Brachypodium distachyon
Bradi4g12060 5.0kb upstream 5.0kb upstream 5000 false Bd4: 12001833-12006832 Brachypodium distachyon
Bradi4g12060 5.0kb downstream 5.0kb downstream 11574 true Bd4: 12006833-12018406 Brachypodium distachyon
Bradi4g12060 5.0kb downstream 5.0kb downstream 5000 false Bd4: 12013407-12018406 Brachypodium distachyon
Bradi4g12060 10.0kb upstream 10.0kb upstream 16574 true Bd4: 11996833-12013406 Brachypodium distachyon
Bradi4g12060 10.0kb upstream 10.0kb upstream 10000 false Bd4: 11996833-12006832 Brachypodium distachyon
Bradi4g12060 10.0kb downstream 10.0kb downstream 16574 true Bd4: 12006833-12023406 Brachypodium distachyon
Bradi4g12060 10.0kb downstream 10.0kb downstream 10000 false Bd4: 12013407-12023406 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577229 5269 Grass View MSA
122044993 5273 Angiosperm View MSA
121345703 5274 Embryophyte View MSA
123424195 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.53        
cufflinks 5.862        
cufflinks 7.201       High
cufflinks 5.043        
cufflinks 4.457        
cufflinks 5.976        
cufflinks 5.913        
cufflinks 3.84       Low
cufflinks 5.134        
cufflinks 4.51        
cufflinks 5.603        
cufflinks 5.643        
cufflinks 4.653        
cufflinks 4.092        
cufflinks 3.687       Low
cufflinks 5.305        
cufflinks 3.659       Low
cufflinks 8.604       High
cufflinks 5.581        
cufflinks 3.496       Low
cufflinks 7.879       High
cufflinks 5.592        
cufflinks 3.694       Low
cufflinks 5.615        
cufflinks 5.82        
cufflinks 6.64        
cufflinks 5.399        
cufflinks 6.638        
cufflinks 5.831        
cufflinks 8.467       High

0 Strain