Gene : Bradi4g08370 B. distachyon v3.1
Defline:  (1 of 66) PF01357 - Pollen allergen (Pollen_allerg_1) Genomic Order:  1105
Name:  ? Bradi4g08370 Secondary Identifier:  ? PAC:32787272
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g08370 0.5kb upstream 0.5kb upstream 875 true Bd4: 7432873-7433747 Brachypodium distachyon
Bradi4g08370 0.5kb upstream 0.5kb upstream 500 false Bd4: 7432873-7433372 Brachypodium distachyon
Bradi4g08370 0.5kb downstream 0.5kb downstream 875 true Bd4: 7433373-7434247 Brachypodium distachyon
Bradi4g08370 0.5kb downstream 0.5kb downstream 500 false Bd4: 7433748-7434247 Brachypodium distachyon
Bradi4g08370 1.0kb upstream 1.0kb upstream 1375 true Bd4: 7432373-7433747 Brachypodium distachyon
Bradi4g08370 1.0kb upstream 1.0kb upstream 1000 false Bd4: 7432373-7433372 Brachypodium distachyon
Bradi4g08370 1.0kb downstream 1.0kb downstream 1375 true Bd4: 7433373-7434747 Brachypodium distachyon
Bradi4g08370 1.0kb downstream 1.0kb downstream 1000 false Bd4: 7433748-7434747 Brachypodium distachyon
Bradi4g08370 2.0kb upstream 2.0kb upstream 2375 true Bd4: 7431373-7433747 Brachypodium distachyon
Bradi4g08370 2.0kb upstream 2.0kb upstream 2000 false Bd4: 7431373-7433372 Brachypodium distachyon
Bradi4g08370 2.0kb downstream 2.0kb downstream 2375 true Bd4: 7433373-7435747 Brachypodium distachyon
Bradi4g08370 2.0kb downstream 2.0kb downstream 2000 false Bd4: 7433748-7435747 Brachypodium distachyon
Bradi4g08370 5.0kb upstream 5.0kb upstream 5375 true Bd4: 7428373-7433747 Brachypodium distachyon
Bradi4g08370 5.0kb upstream 5.0kb upstream 5000 false Bd4: 7428373-7433372 Brachypodium distachyon
Bradi4g08370 5.0kb downstream 5.0kb downstream 5375 true Bd4: 7433373-7438747 Brachypodium distachyon
Bradi4g08370 5.0kb downstream 5.0kb downstream 5000 false Bd4: 7433748-7438747 Brachypodium distachyon
Bradi4g08370 10.0kb upstream 10.0kb upstream 10375 true Bd4: 7423373-7433747 Brachypodium distachyon
Bradi4g08370 10.0kb upstream 10.0kb upstream 10000 false Bd4: 7423373-7433372 Brachypodium distachyon
Bradi4g08370 10.0kb downstream 10.0kb downstream 10375 true Bd4: 7433373-7443747 Brachypodium distachyon
Bradi4g08370 10.0kb downstream 10.0kb downstream 10000 false Bd4: 7433748-7443747 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121901322 5273 Angiosperm Singleton cluster - no MSA
124474302 5269 Grass Singleton cluster - no MSA
121171844 5274 Embryophyte Singleton cluster - no MSA
123210715 5275 Viridiplantae Singleton cluster - no MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.139        
cufflinks 0.049     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.201        
cufflinks 0.068     Low  
cufflinks 0.164        
cufflinks 0.078     Low  
cufflinks 0.034     Low Low
cufflinks 0.134        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.132        
cufflinks 0.166        
cufflinks 0.158        
cufflinks 0.315        
cufflinks 0.195        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.376       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.179        
cufflinks 0.24        
cufflinks 0.071     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.065     Low  
cufflinks 0.035     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain