Gene : Bradi4g15350 B. distachyon v3.1
Defline:  (1 of 1) K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) Genomic Order:  2088
Name:  ? Bradi4g15350 Secondary Identifier:  ? PAC:32787857
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g15350 0.5kb upstream 0.5kb upstream 2600 true Bd4: 16057414-16060013 Brachypodium distachyon
Bradi4g15350 0.5kb upstream 0.5kb upstream 500 false Bd4: 16059514-16060013 Brachypodium distachyon
Bradi4g15350 0.5kb downstream 0.5kb downstream 2600 true Bd4: 16056914-16059513 Brachypodium distachyon
Bradi4g15350 0.5kb downstream 0.5kb downstream 500 false Bd4: 16056914-16057413 Brachypodium distachyon
Bradi4g15350 1.0kb upstream 1.0kb upstream 3100 true Bd4: 16057414-16060513 Brachypodium distachyon
Bradi4g15350 1.0kb upstream 1.0kb upstream 1000 false Bd4: 16059514-16060513 Brachypodium distachyon
Bradi4g15350 1.0kb downstream 1.0kb downstream 3100 true Bd4: 16056414-16059513 Brachypodium distachyon
Bradi4g15350 1.0kb downstream 1.0kb downstream 1000 false Bd4: 16056414-16057413 Brachypodium distachyon
Bradi4g15350 2.0kb upstream 2.0kb upstream 4100 true Bd4: 16057414-16061513 Brachypodium distachyon
Bradi4g15350 2.0kb upstream 2.0kb upstream 2000 false Bd4: 16059514-16061513 Brachypodium distachyon
Bradi4g15350 2.0kb downstream 2.0kb downstream 4100 true Bd4: 16055414-16059513 Brachypodium distachyon
Bradi4g15350 2.0kb downstream 2.0kb downstream 2000 false Bd4: 16055414-16057413 Brachypodium distachyon
Bradi4g15350 5.0kb upstream 5.0kb upstream 7100 true Bd4: 16057414-16064513 Brachypodium distachyon
Bradi4g15350 5.0kb upstream 5.0kb upstream 5000 false Bd4: 16059514-16064513 Brachypodium distachyon
Bradi4g15350 5.0kb downstream 5.0kb downstream 7100 true Bd4: 16052414-16059513 Brachypodium distachyon
Bradi4g15350 5.0kb downstream 5.0kb downstream 5000 false Bd4: 16052414-16057413 Brachypodium distachyon
Bradi4g15350 10.0kb upstream 10.0kb upstream 12100 true Bd4: 16057414-16069513 Brachypodium distachyon
Bradi4g15350 10.0kb upstream 10.0kb upstream 10000 false Bd4: 16059514-16069513 Brachypodium distachyon
Bradi4g15350 10.0kb downstream 10.0kb downstream 12100 true Bd4: 16047414-16059513 Brachypodium distachyon
Bradi4g15350 10.0kb downstream 10.0kb downstream 10000 false Bd4: 16047414-16057413 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570254 5269 Grass View MSA
122045887 5273 Angiosperm View MSA
121346687 5274 Embryophyte View MSA
123425060 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.347     High  
cufflinks 20.093     High  
cufflinks 15.015     High  
cufflinks 18.874     High  
cufflinks 11.223     High  
cufflinks 15.632     High  
cufflinks 18.744     High  
cufflinks 14.203     High  
cufflinks 15.192     High  
cufflinks 13.981     High  
cufflinks 2.871       Low
cufflinks 11.434     High  
cufflinks 2.073       Low
cufflinks 2.044       Low
cufflinks 5.321       Low
cufflinks 16.686     High  
cufflinks 23.375     High  
cufflinks 37.353     High High
cufflinks 16.905     High  
cufflinks 4.075       Low
cufflinks 19.945     High  
cufflinks 10.613     High  
cufflinks 11.299     High  
cufflinks 11.252     High  
cufflinks 20.282     High  
cufflinks 14.245     High  
cufflinks 2.901       Low
cufflinks 12.844     High  
cufflinks 12.166     High  
cufflinks 17.966     High  

0 Strain