Gene : Bradi4g16530 B. distachyon v3.1
Defline:  (1 of 2) PTHR11746:SF89 - MAF-LIKE PROTEIN Genomic Order:  2212
Name:  ? Bradi4g16530 Secondary Identifier:  ? PAC:32785348
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g16530 0.5kb upstream 0.5kb upstream 5790 true Bd4: 17343962-17349751 Brachypodium distachyon
Bradi4g16530 0.5kb upstream 0.5kb upstream 500 false Bd4: 17343962-17344461 Brachypodium distachyon
Bradi4g16530 0.5kb downstream 0.5kb downstream 5790 true Bd4: 17344462-17350251 Brachypodium distachyon
Bradi4g16530 0.5kb downstream 0.5kb downstream 500 false Bd4: 17349752-17350251 Brachypodium distachyon
Bradi4g16530 1.0kb upstream 1.0kb upstream 6290 true Bd4: 17343462-17349751 Brachypodium distachyon
Bradi4g16530 1.0kb upstream 1.0kb upstream 1000 false Bd4: 17343462-17344461 Brachypodium distachyon
Bradi4g16530 1.0kb downstream 1.0kb downstream 6290 true Bd4: 17344462-17350751 Brachypodium distachyon
Bradi4g16530 1.0kb downstream 1.0kb downstream 1000 false Bd4: 17349752-17350751 Brachypodium distachyon
Bradi4g16530 2.0kb upstream 2.0kb upstream 7290 true Bd4: 17342462-17349751 Brachypodium distachyon
Bradi4g16530 2.0kb upstream 2.0kb upstream 2000 false Bd4: 17342462-17344461 Brachypodium distachyon
Bradi4g16530 2.0kb downstream 2.0kb downstream 7290 true Bd4: 17344462-17351751 Brachypodium distachyon
Bradi4g16530 2.0kb downstream 2.0kb downstream 2000 false Bd4: 17349752-17351751 Brachypodium distachyon
Bradi4g16530 5.0kb upstream 5.0kb upstream 10290 true Bd4: 17339462-17349751 Brachypodium distachyon
Bradi4g16530 5.0kb upstream 5.0kb upstream 5000 false Bd4: 17339462-17344461 Brachypodium distachyon
Bradi4g16530 5.0kb downstream 5.0kb downstream 10290 true Bd4: 17344462-17354751 Brachypodium distachyon
Bradi4g16530 5.0kb downstream 5.0kb downstream 5000 false Bd4: 17349752-17354751 Brachypodium distachyon
Bradi4g16530 10.0kb upstream 10.0kb upstream 15290 true Bd4: 17334462-17349751 Brachypodium distachyon
Bradi4g16530 10.0kb upstream 10.0kb upstream 10000 false Bd4: 17334462-17344461 Brachypodium distachyon
Bradi4g16530 10.0kb downstream 10.0kb downstream 15290 true Bd4: 17344462-17359751 Brachypodium distachyon
Bradi4g16530 10.0kb downstream 10.0kb downstream 10000 false Bd4: 17349752-17359751 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584749 5269 Grass View MSA
122045669 5273 Angiosperm View MSA
121347130 5274 Embryophyte View MSA
123427064 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.424        
cufflinks 5.135        
cufflinks 5.218        
cufflinks 5.37       High
cufflinks 3.123        
cufflinks 3.8        
cufflinks 4.572        
cufflinks 3.663        
cufflinks 3.631        
cufflinks 5.004        
cufflinks 3.401        
cufflinks 3.466        
cufflinks 2.577        
cufflinks 3.182        
cufflinks 3.938        
cufflinks 4.302        
cufflinks 4.576        
cufflinks 1.227       Low
cufflinks 3.308        
cufflinks 2.262       Low
cufflinks 2.623        
cufflinks 4.737        
cufflinks 3.466        
cufflinks 3.081        
cufflinks 4.142        
cufflinks 5.908       High
cufflinks 1.689       Low
cufflinks 5.504       High
cufflinks 4.69        
cufflinks 3.973        

0 Strain