Gene : Bradi4g16893 B. distachyon v3.1
Defline:  (1 of 1) PTHR12363:SF27 - EXPORTIN 1-LIKE PROTEIN DOMAIN-CONTAINING PROTEIN Genomic Order:  2267
Name:  ? Bradi4g16893 Secondary Identifier:  ? PAC:32789143
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g16893 0.5kb upstream 0.5kb upstream 15365 true Bd4: 17744039-17759403 Brachypodium distachyon
Bradi4g16893 0.5kb upstream 0.5kb upstream 500 false Bd4: 17744039-17744538 Brachypodium distachyon
Bradi4g16893 0.5kb downstream 0.5kb downstream 15365 true Bd4: 17744539-17759903 Brachypodium distachyon
Bradi4g16893 0.5kb downstream 0.5kb downstream 500 false Bd4: 17759404-17759903 Brachypodium distachyon
Bradi4g16893 1.0kb upstream 1.0kb upstream 15865 true Bd4: 17743539-17759403 Brachypodium distachyon
Bradi4g16893 1.0kb upstream 1.0kb upstream 1000 false Bd4: 17743539-17744538 Brachypodium distachyon
Bradi4g16893 1.0kb downstream 1.0kb downstream 15865 true Bd4: 17744539-17760403 Brachypodium distachyon
Bradi4g16893 1.0kb downstream 1.0kb downstream 1000 false Bd4: 17759404-17760403 Brachypodium distachyon
Bradi4g16893 2.0kb upstream 2.0kb upstream 16865 true Bd4: 17742539-17759403 Brachypodium distachyon
Bradi4g16893 2.0kb upstream 2.0kb upstream 2000 false Bd4: 17742539-17744538 Brachypodium distachyon
Bradi4g16893 2.0kb downstream 2.0kb downstream 16865 true Bd4: 17744539-17761403 Brachypodium distachyon
Bradi4g16893 2.0kb downstream 2.0kb downstream 2000 false Bd4: 17759404-17761403 Brachypodium distachyon
Bradi4g16893 5.0kb upstream 5.0kb upstream 19865 true Bd4: 17739539-17759403 Brachypodium distachyon
Bradi4g16893 5.0kb upstream 5.0kb upstream 5000 false Bd4: 17739539-17744538 Brachypodium distachyon
Bradi4g16893 5.0kb downstream 5.0kb downstream 19865 true Bd4: 17744539-17764403 Brachypodium distachyon
Bradi4g16893 5.0kb downstream 5.0kb downstream 5000 false Bd4: 17759404-17764403 Brachypodium distachyon
Bradi4g16893 10.0kb upstream 10.0kb upstream 24865 true Bd4: 17734539-17759403 Brachypodium distachyon
Bradi4g16893 10.0kb upstream 10.0kb upstream 10000 false Bd4: 17734539-17744538 Brachypodium distachyon
Bradi4g16893 10.0kb downstream 10.0kb downstream 24865 true Bd4: 17744539-17769403 Brachypodium distachyon
Bradi4g16893 10.0kb downstream 10.0kb downstream 10000 false Bd4: 17759404-17769403 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578170 5269 Grass View MSA
122047073 5273 Angiosperm View MSA
121346085 5274 Embryophyte View MSA
123427248 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.465        
cufflinks 1.117        
cufflinks 1.185        
cufflinks 0.71        
cufflinks 0.265       Low
cufflinks 1.033        
cufflinks 1.018        
cufflinks 0.66        
cufflinks 0.971        
cufflinks 0.523        
cufflinks 1.033        
cufflinks 0.886        
cufflinks 0.918        
cufflinks 0.753        
cufflinks 0.354       Low
cufflinks 1.249       High
cufflinks 0.507        
cufflinks 1.422       High
cufflinks 0.532        
cufflinks 0.189       Low
cufflinks 0.639        
cufflinks 1.048        
cufflinks 0.589        
cufflinks 0.803        
cufflinks 0.829        
cufflinks 1.023        
cufflinks 0.876        
cufflinks 0.934        
cufflinks 0.934        
cufflinks 0.801        

0 Strain