Gene : Bradi4g13290 B. distachyon v3.1
Defline:  (1 of 7) PTHR16007 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED Genomic Order:  1791
Name:  ? Bradi4g13290 Secondary Identifier:  ? PAC:32786346
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g13290 0.5kb upstream 0.5kb upstream 3787 true Bd4: 13617182-13620968 Brachypodium distachyon
Bradi4g13290 0.5kb upstream 0.5kb upstream 500 false Bd4: 13617182-13617681 Brachypodium distachyon
Bradi4g13290 0.5kb downstream 0.5kb downstream 3787 true Bd4: 13617682-13621468 Brachypodium distachyon
Bradi4g13290 0.5kb downstream 0.5kb downstream 500 false Bd4: 13620969-13621468 Brachypodium distachyon
Bradi4g13290 1.0kb upstream 1.0kb upstream 4287 true Bd4: 13616682-13620968 Brachypodium distachyon
Bradi4g13290 1.0kb upstream 1.0kb upstream 1000 false Bd4: 13616682-13617681 Brachypodium distachyon
Bradi4g13290 1.0kb downstream 1.0kb downstream 4287 true Bd4: 13617682-13621968 Brachypodium distachyon
Bradi4g13290 1.0kb downstream 1.0kb downstream 1000 false Bd4: 13620969-13621968 Brachypodium distachyon
Bradi4g13290 2.0kb upstream 2.0kb upstream 5287 true Bd4: 13615682-13620968 Brachypodium distachyon
Bradi4g13290 2.0kb upstream 2.0kb upstream 2000 false Bd4: 13615682-13617681 Brachypodium distachyon
Bradi4g13290 2.0kb downstream 2.0kb downstream 5287 true Bd4: 13617682-13622968 Brachypodium distachyon
Bradi4g13290 2.0kb downstream 2.0kb downstream 2000 false Bd4: 13620969-13622968 Brachypodium distachyon
Bradi4g13290 5.0kb upstream 5.0kb upstream 8287 true Bd4: 13612682-13620968 Brachypodium distachyon
Bradi4g13290 5.0kb upstream 5.0kb upstream 5000 false Bd4: 13612682-13617681 Brachypodium distachyon
Bradi4g13290 5.0kb downstream 5.0kb downstream 8287 true Bd4: 13617682-13625968 Brachypodium distachyon
Bradi4g13290 5.0kb downstream 5.0kb downstream 5000 false Bd4: 13620969-13625968 Brachypodium distachyon
Bradi4g13290 10.0kb upstream 10.0kb upstream 13287 true Bd4: 13607682-13620968 Brachypodium distachyon
Bradi4g13290 10.0kb upstream 10.0kb upstream 10000 false Bd4: 13607682-13617681 Brachypodium distachyon
Bradi4g13290 10.0kb downstream 10.0kb downstream 13287 true Bd4: 13617682-13630968 Brachypodium distachyon
Bradi4g13290 10.0kb downstream 10.0kb downstream 10000 false Bd4: 13620969-13630968 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590856 5269 Grass View MSA
122047488 5273 Angiosperm View MSA
121350277 5274 Embryophyte View MSA
123426219 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.048        
cufflinks 2.25        
cufflinks 2.681        
cufflinks 1.913        
cufflinks 1.051       Low
cufflinks 1.943        
cufflinks 2.174        
cufflinks 2.237        
cufflinks 1.971        
cufflinks 1.688        
cufflinks 2.7        
cufflinks 1.832        
cufflinks 2.587        
cufflinks 1.826        
cufflinks 1.83        
cufflinks 2.139        
cufflinks 2.456        
cufflinks 8.606       High
cufflinks 1.256        
cufflinks 0.821       Low
cufflinks 5.26       High
cufflinks 2.06        
cufflinks 2.04        
cufflinks 2.006        
cufflinks 1.453        
cufflinks 2.003        
cufflinks 2.325        
cufflinks 2.308        
cufflinks 1.963        
cufflinks 3.56        

0 Strain