Gene : Pp3c13_12110 P. patens v3.3
Defline:  (1 of 2) PTHR11566:SF44 - DYNAMIN-LIKE PROTEIN C Genomic Order:  496
Name:  ? Pp3c13_12110 Secondary Identifier:  ? PAC:32930435
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c13_12110 0.5kb upstream 0.5kb upstream 6516 true Chr13: 8907344-8913859 Physcomitrium patens
Pp3c13_12110 0.5kb upstream 0.5kb upstream 500 false Chr13: 8907344-8907843 Physcomitrium patens
Pp3c13_12110 0.5kb downstream 0.5kb downstream 6516 true Chr13: 8907844-8914359 Physcomitrium patens
Pp3c13_12110 0.5kb downstream 0.5kb downstream 500 false Chr13: 8913860-8914359 Physcomitrium patens
Pp3c13_12110 1.0kb upstream 1.0kb upstream 7016 true Chr13: 8906844-8913859 Physcomitrium patens
Pp3c13_12110 1.0kb upstream 1.0kb upstream 1000 false Chr13: 8906844-8907843 Physcomitrium patens
Pp3c13_12110 1.0kb downstream 1.0kb downstream 7016 true Chr13: 8907844-8914859 Physcomitrium patens
Pp3c13_12110 1.0kb downstream 1.0kb downstream 1000 false Chr13: 8913860-8914859 Physcomitrium patens
Pp3c13_12110 2.0kb upstream 2.0kb upstream 8016 true Chr13: 8905844-8913859 Physcomitrium patens
Pp3c13_12110 2.0kb upstream 2.0kb upstream 2000 false Chr13: 8905844-8907843 Physcomitrium patens
Pp3c13_12110 2.0kb downstream 2.0kb downstream 8016 true Chr13: 8907844-8915859 Physcomitrium patens
Pp3c13_12110 2.0kb downstream 2.0kb downstream 2000 false Chr13: 8913860-8915859 Physcomitrium patens
Pp3c13_12110 5.0kb upstream 5.0kb upstream 11016 true Chr13: 8902844-8913859 Physcomitrium patens
Pp3c13_12110 5.0kb upstream 5.0kb upstream 5000 false Chr13: 8902844-8907843 Physcomitrium patens
Pp3c13_12110 5.0kb downstream 5.0kb downstream 11016 true Chr13: 8907844-8918859 Physcomitrium patens
Pp3c13_12110 5.0kb downstream 5.0kb downstream 5000 false Chr13: 8913860-8918859 Physcomitrium patens
Pp3c13_12110 10.0kb upstream 10.0kb upstream 16016 true Chr13: 8897844-8913859 Physcomitrium patens
Pp3c13_12110 10.0kb upstream 10.0kb upstream 10000 false Chr13: 8897844-8907843 Physcomitrium patens
Pp3c13_12110 10.0kb downstream 10.0kb downstream 16016 true Chr13: 8907844-8923859 Physcomitrium patens
Pp3c13_12110 10.0kb downstream 10.0kb downstream 10000 false Chr13: 8913860-8923859 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121346738 5274 Embryophyte View MSA
123424369 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.841        
cufflinks 0.477       Low
cufflinks 1.552        
cufflinks 3.176        
cufflinks 4.75       High
cufflinks 0.505       Low
cufflinks 0.545       Low
cufflinks 2.972        
cufflinks 3.081        
cufflinks 3.709        
cufflinks 1.869        
cufflinks 0.471       Low
cufflinks 1.416        
cufflinks 4.179       High
cufflinks 3.427        
cufflinks 2.383        
cufflinks 2.096        
cufflinks 1.203        
cufflinks 3.577        
cufflinks 3.097        
cufflinks 1.666        
cufflinks 3.353        
cufflinks 0.217       Low
cufflinks 1.338        
cufflinks 3.485        
cufflinks 3.296        
cufflinks 0.7       Low
cufflinks 0.963        
cufflinks 1.13        
cufflinks 1.304        

0 Strain