Gene : Pp3c12_21860 P. patens v3.3
Defline:  (1 of 162) PTHR23257 - SERINE-THREONINE PROTEIN KINASE Genomic Order:  954
Name:  ? Pp3c12_21860 Secondary Identifier:  ? PAC:32975156
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

7 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c12_21860 0.5kb upstream 0.5kb upstream 5511 true Chr12: 14538137-14543647 Physcomitrium patens
Pp3c12_21860 0.5kb upstream 0.5kb upstream 500 false Chr12: 14543148-14543647 Physcomitrium patens
Pp3c12_21860 0.5kb downstream 0.5kb downstream 5511 true Chr12: 14537637-14543147 Physcomitrium patens
Pp3c12_21860 0.5kb downstream 0.5kb downstream 500 false Chr12: 14537637-14538136 Physcomitrium patens
Pp3c12_21860 1.0kb upstream 1.0kb upstream 6011 true Chr12: 14538137-14544147 Physcomitrium patens
Pp3c12_21860 1.0kb upstream 1.0kb upstream 1000 false Chr12: 14543148-14544147 Physcomitrium patens
Pp3c12_21860 1.0kb downstream 1.0kb downstream 6011 true Chr12: 14537137-14543147 Physcomitrium patens
Pp3c12_21860 1.0kb downstream 1.0kb downstream 1000 false Chr12: 14537137-14538136 Physcomitrium patens
Pp3c12_21860 2.0kb upstream 2.0kb upstream 7011 true Chr12: 14538137-14545147 Physcomitrium patens
Pp3c12_21860 2.0kb upstream 2.0kb upstream 2000 false Chr12: 14543148-14545147 Physcomitrium patens
Pp3c12_21860 2.0kb downstream 2.0kb downstream 7011 true Chr12: 14536137-14543147 Physcomitrium patens
Pp3c12_21860 2.0kb downstream 2.0kb downstream 2000 false Chr12: 14536137-14538136 Physcomitrium patens
Pp3c12_21860 5.0kb upstream 5.0kb upstream 10011 true Chr12: 14538137-14548147 Physcomitrium patens
Pp3c12_21860 5.0kb upstream 5.0kb upstream 5000 false Chr12: 14543148-14548147 Physcomitrium patens
Pp3c12_21860 5.0kb downstream 5.0kb downstream 10011 true Chr12: 14533137-14543147 Physcomitrium patens
Pp3c12_21860 5.0kb downstream 5.0kb downstream 5000 false Chr12: 14533137-14538136 Physcomitrium patens
Pp3c12_21860 10.0kb upstream 10.0kb upstream 15011 true Chr12: 14538137-14553147 Physcomitrium patens
Pp3c12_21860 10.0kb upstream 10.0kb upstream 10000 false Chr12: 14543148-14553147 Physcomitrium patens
Pp3c12_21860 10.0kb downstream 10.0kb downstream 15011 true Chr12: 14528137-14543147 Physcomitrium patens
Pp3c12_21860 10.0kb downstream 10.0kb downstream 10000 false Chr12: 14528137-14538136 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343304 5274 Embryophyte View MSA
123379585 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.199        
cufflinks 13.038       High
cufflinks 12.306       High
cufflinks 6.737        
cufflinks 10.281        
cufflinks 5.652        
cufflinks 10.885        
cufflinks 1.635       Low
cufflinks 5.174        
cufflinks 9.164        
cufflinks 1.854       Low
cufflinks 9.853        
cufflinks 11.118        
cufflinks 9.228        
cufflinks 1.529       Low
cufflinks 8.049        
cufflinks 5.724        
cufflinks 11.407       High
cufflinks 8.539        
cufflinks 6.304        
cufflinks 5.457        
cufflinks 4.271        
cufflinks 6.685        
cufflinks 7.462        
cufflinks 2.857       Low
cufflinks 10.907        
cufflinks 4.652        
cufflinks 7.06        
cufflinks 5.89        
cufflinks 3.345       Low

0 Strain