Gene : Pp3c13_7870 P. patens v3.3
Defline:  (1 of 1) PF08320 - PIG-X / PBN1 (PIG-X) Genomic Order:  329
Name:  ? Pp3c13_7870 Secondary Identifier:  ? PAC:32930418
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c13_7870 0.5kb upstream 0.5kb upstream 4353 true Chr13: 5230983-5235335 Physcomitrium patens
Pp3c13_7870 0.5kb upstream 0.5kb upstream 500 false Chr13: 5234836-5235335 Physcomitrium patens
Pp3c13_7870 0.5kb downstream 0.5kb downstream 4353 true Chr13: 5230483-5234835 Physcomitrium patens
Pp3c13_7870 0.5kb downstream 0.5kb downstream 500 false Chr13: 5230483-5230982 Physcomitrium patens
Pp3c13_7870 1.0kb upstream 1.0kb upstream 4853 true Chr13: 5230983-5235835 Physcomitrium patens
Pp3c13_7870 1.0kb upstream 1.0kb upstream 1000 false Chr13: 5234836-5235835 Physcomitrium patens
Pp3c13_7870 1.0kb downstream 1.0kb downstream 4853 true Chr13: 5229983-5234835 Physcomitrium patens
Pp3c13_7870 1.0kb downstream 1.0kb downstream 1000 false Chr13: 5229983-5230982 Physcomitrium patens
Pp3c13_7870 2.0kb upstream 2.0kb upstream 5853 true Chr13: 5230983-5236835 Physcomitrium patens
Pp3c13_7870 2.0kb upstream 2.0kb upstream 2000 false Chr13: 5234836-5236835 Physcomitrium patens
Pp3c13_7870 2.0kb downstream 2.0kb downstream 5853 true Chr13: 5228983-5234835 Physcomitrium patens
Pp3c13_7870 2.0kb downstream 2.0kb downstream 2000 false Chr13: 5228983-5230982 Physcomitrium patens
Pp3c13_7870 5.0kb upstream 5.0kb upstream 8853 true Chr13: 5230983-5239835 Physcomitrium patens
Pp3c13_7870 5.0kb upstream 5.0kb upstream 5000 false Chr13: 5234836-5239835 Physcomitrium patens
Pp3c13_7870 5.0kb downstream 5.0kb downstream 8853 true Chr13: 5225983-5234835 Physcomitrium patens
Pp3c13_7870 5.0kb downstream 5.0kb downstream 5000 false Chr13: 5225983-5230982 Physcomitrium patens
Pp3c13_7870 10.0kb upstream 10.0kb upstream 13853 true Chr13: 5230983-5244835 Physcomitrium patens
Pp3c13_7870 10.0kb upstream 10.0kb upstream 10000 false Chr13: 5234836-5244835 Physcomitrium patens
Pp3c13_7870 10.0kb downstream 10.0kb downstream 13853 true Chr13: 5220983-5234835 Physcomitrium patens
Pp3c13_7870 10.0kb downstream 10.0kb downstream 10000 false Chr13: 5220983-5230982 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121311811 5274 Embryophyte View MSA
123349053 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.411        
cufflinks 0.773        
cufflinks 0.392        
cufflinks 0.738        
cufflinks 0.862        
cufflinks 0.093       Low
cufflinks 1.053       High
cufflinks 0.805        
cufflinks 0.366        
cufflinks 0.654        
cufflinks 0.889        
cufflinks 0.121       Low
cufflinks 0.425        
cufflinks 0.44        
cufflinks 0.758        
cufflinks 0.821        
cufflinks 0.957        
cufflinks 0.789        
cufflinks 0.662        
cufflinks 0.431        
cufflinks 0.841        
cufflinks 0.337        
cufflinks 0.492        
cufflinks 0.549        
cufflinks 0.253       Low
cufflinks 0.535        
cufflinks 0.571        
cufflinks 0.081       Low
cufflinks 0.684        
cufflinks 0.573        

0 Strain