Gene : Pp3c13_20510 P. patens v3.3
Defline:  (1 of 8) PF13359 - DDE superfamily endonuclease (DDE_Tnp_4) Genomic Order:  877
Name:  ? Pp3c13_20510 Secondary Identifier:  ? PAC:32930522
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c13_20510 0.5kb upstream 0.5kb upstream 2106 true Chr13: 14413214-14415319 Physcomitrium patens
Pp3c13_20510 0.5kb upstream 0.5kb upstream 500 false Chr13: 14414820-14415319 Physcomitrium patens
Pp3c13_20510 0.5kb downstream 0.5kb downstream 2106 true Chr13: 14412714-14414819 Physcomitrium patens
Pp3c13_20510 0.5kb downstream 0.5kb downstream 500 false Chr13: 14412714-14413213 Physcomitrium patens
Pp3c13_20510 1.0kb upstream 1.0kb upstream 2606 true Chr13: 14413214-14415819 Physcomitrium patens
Pp3c13_20510 1.0kb upstream 1.0kb upstream 1000 false Chr13: 14414820-14415819 Physcomitrium patens
Pp3c13_20510 1.0kb downstream 1.0kb downstream 2606 true Chr13: 14412214-14414819 Physcomitrium patens
Pp3c13_20510 1.0kb downstream 1.0kb downstream 1000 false Chr13: 14412214-14413213 Physcomitrium patens
Pp3c13_20510 2.0kb upstream 2.0kb upstream 3606 true Chr13: 14413214-14416819 Physcomitrium patens
Pp3c13_20510 2.0kb upstream 2.0kb upstream 2000 false Chr13: 14414820-14416819 Physcomitrium patens
Pp3c13_20510 2.0kb downstream 2.0kb downstream 3606 true Chr13: 14411214-14414819 Physcomitrium patens
Pp3c13_20510 2.0kb downstream 2.0kb downstream 2000 false Chr13: 14411214-14413213 Physcomitrium patens
Pp3c13_20510 5.0kb upstream 5.0kb upstream 6606 true Chr13: 14413214-14419819 Physcomitrium patens
Pp3c13_20510 5.0kb upstream 5.0kb upstream 5000 false Chr13: 14414820-14419819 Physcomitrium patens
Pp3c13_20510 5.0kb downstream 5.0kb downstream 6606 true Chr13: 14408214-14414819 Physcomitrium patens
Pp3c13_20510 5.0kb downstream 5.0kb downstream 5000 false Chr13: 14408214-14413213 Physcomitrium patens
Pp3c13_20510 10.0kb upstream 10.0kb upstream 11606 true Chr13: 14413214-14424819 Physcomitrium patens
Pp3c13_20510 10.0kb upstream 10.0kb upstream 10000 false Chr13: 14414820-14424819 Physcomitrium patens
Pp3c13_20510 10.0kb downstream 10.0kb downstream 11606 true Chr13: 14403214-14414819 Physcomitrium patens
Pp3c13_20510 10.0kb downstream 10.0kb downstream 10000 false Chr13: 14403214-14413213 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121351284 5274 Embryophyte View MSA
123382098 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain