Gene : Pp3c14_14790 P. patens v3.3
Defline:  (1 of 1) PTHR10293:SF45 - MONOTHIOL GLUTAREDOXIN-S16, CHLOROPLASTIC Genomic Order:  750
Name:  ? Pp3c14_14790 Secondary Identifier:  ? PAC:32962984
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppatens THIOREDOX-PWY Physcomitrium patens pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c14_14790 0.5kb upstream 0.5kb upstream 3127 true Chr14: 9363077-9366203 Physcomitrium patens
Pp3c14_14790 0.5kb upstream 0.5kb upstream 500 false Chr14: 9363077-9363576 Physcomitrium patens
Pp3c14_14790 0.5kb downstream 0.5kb downstream 3127 true Chr14: 9363577-9366703 Physcomitrium patens
Pp3c14_14790 0.5kb downstream 0.5kb downstream 500 false Chr14: 9366204-9366703 Physcomitrium patens
Pp3c14_14790 1.0kb upstream 1.0kb upstream 3627 true Chr14: 9362577-9366203 Physcomitrium patens
Pp3c14_14790 1.0kb upstream 1.0kb upstream 1000 false Chr14: 9362577-9363576 Physcomitrium patens
Pp3c14_14790 1.0kb downstream 1.0kb downstream 3627 true Chr14: 9363577-9367203 Physcomitrium patens
Pp3c14_14790 1.0kb downstream 1.0kb downstream 1000 false Chr14: 9366204-9367203 Physcomitrium patens
Pp3c14_14790 2.0kb upstream 2.0kb upstream 4627 true Chr14: 9361577-9366203 Physcomitrium patens
Pp3c14_14790 2.0kb upstream 2.0kb upstream 2000 false Chr14: 9361577-9363576 Physcomitrium patens
Pp3c14_14790 2.0kb downstream 2.0kb downstream 4627 true Chr14: 9363577-9368203 Physcomitrium patens
Pp3c14_14790 2.0kb downstream 2.0kb downstream 2000 false Chr14: 9366204-9368203 Physcomitrium patens
Pp3c14_14790 5.0kb upstream 5.0kb upstream 7627 true Chr14: 9358577-9366203 Physcomitrium patens
Pp3c14_14790 5.0kb upstream 5.0kb upstream 5000 false Chr14: 9358577-9363576 Physcomitrium patens
Pp3c14_14790 5.0kb downstream 5.0kb downstream 7627 true Chr14: 9363577-9371203 Physcomitrium patens
Pp3c14_14790 5.0kb downstream 5.0kb downstream 5000 false Chr14: 9366204-9371203 Physcomitrium patens
Pp3c14_14790 10.0kb upstream 10.0kb upstream 12627 true Chr14: 9353577-9366203 Physcomitrium patens
Pp3c14_14790 10.0kb upstream 10.0kb upstream 10000 false Chr14: 9353577-9363576 Physcomitrium patens
Pp3c14_14790 10.0kb downstream 10.0kb downstream 12627 true Chr14: 9363577-9376203 Physcomitrium patens
Pp3c14_14790 10.0kb downstream 10.0kb downstream 10000 false Chr14: 9366204-9376203 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121346654 5274 Embryophyte View MSA
123423970 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.274        
cufflinks 4.401        
cufflinks 5.251        
cufflinks 4.07        
cufflinks 5.977       High
cufflinks 4.416        
cufflinks 5.081        
cufflinks 3.801        
cufflinks 3.291        
cufflinks 4.547        
cufflinks 4.582        
cufflinks 3.118        
cufflinks 3.305        
cufflinks 1.799       Low
cufflinks 3.84        
cufflinks 2.325        
cufflinks 4.235        
cufflinks 6.434       High
cufflinks 4.203        
cufflinks 3.713        
cufflinks 2.139        
cufflinks 4.253        
cufflinks 0.671       Low
cufflinks 1.555       Low
cufflinks 5.708        
cufflinks 3.813        
cufflinks 0.636       Low
cufflinks 3.339        
cufflinks 1.924       Low
cufflinks 3.662        

0 Strain