Gene : Pp3c14_3560 P. patens v3.3
Defline:  (1 of 1) PTHR11702:SF3 - GTP-BINDING PROTEIN 10 Genomic Order:  148
Name:  ? Pp3c14_3560 Secondary Identifier:  ? PAC:32960511
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c14_3560 0.5kb upstream 0.5kb upstream 6106 true Chr14: 2423421-2429526 Physcomitrium patens
Pp3c14_3560 0.5kb upstream 0.5kb upstream 500 false Chr14: 2429027-2429526 Physcomitrium patens
Pp3c14_3560 0.5kb downstream 0.5kb downstream 6106 true Chr14: 2422921-2429026 Physcomitrium patens
Pp3c14_3560 0.5kb downstream 0.5kb downstream 500 false Chr14: 2422921-2423420 Physcomitrium patens
Pp3c14_3560 1.0kb upstream 1.0kb upstream 6606 true Chr14: 2423421-2430026 Physcomitrium patens
Pp3c14_3560 1.0kb upstream 1.0kb upstream 1000 false Chr14: 2429027-2430026 Physcomitrium patens
Pp3c14_3560 1.0kb downstream 1.0kb downstream 6606 true Chr14: 2422421-2429026 Physcomitrium patens
Pp3c14_3560 1.0kb downstream 1.0kb downstream 1000 false Chr14: 2422421-2423420 Physcomitrium patens
Pp3c14_3560 2.0kb upstream 2.0kb upstream 7606 true Chr14: 2423421-2431026 Physcomitrium patens
Pp3c14_3560 2.0kb upstream 2.0kb upstream 2000 false Chr14: 2429027-2431026 Physcomitrium patens
Pp3c14_3560 2.0kb downstream 2.0kb downstream 7606 true Chr14: 2421421-2429026 Physcomitrium patens
Pp3c14_3560 2.0kb downstream 2.0kb downstream 2000 false Chr14: 2421421-2423420 Physcomitrium patens
Pp3c14_3560 5.0kb upstream 5.0kb upstream 10606 true Chr14: 2423421-2434026 Physcomitrium patens
Pp3c14_3560 5.0kb upstream 5.0kb upstream 5000 false Chr14: 2429027-2434026 Physcomitrium patens
Pp3c14_3560 5.0kb downstream 5.0kb downstream 10606 true Chr14: 2418421-2429026 Physcomitrium patens
Pp3c14_3560 5.0kb downstream 5.0kb downstream 5000 false Chr14: 2418421-2423420 Physcomitrium patens
Pp3c14_3560 10.0kb upstream 10.0kb upstream 15606 true Chr14: 2423421-2439026 Physcomitrium patens
Pp3c14_3560 10.0kb upstream 10.0kb upstream 10000 false Chr14: 2429027-2439026 Physcomitrium patens
Pp3c14_3560 10.0kb downstream 10.0kb downstream 15606 true Chr14: 2413421-2429026 Physcomitrium patens
Pp3c14_3560 10.0kb downstream 10.0kb downstream 10000 false Chr14: 2413421-2423420 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121348183 5274 Embryophyte View MSA
123428506 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.163        
cufflinks 1.496        
cufflinks 0.24       Low
cufflinks 2.028        
cufflinks 0.123       Low
cufflinks 2.989       High
cufflinks 1.681        
cufflinks 2.628        
cufflinks 1.722        
cufflinks 1.37        
cufflinks 0.736        
cufflinks 0.18       Low
cufflinks 1.343        
cufflinks 1.109        
cufflinks 2.079        
cufflinks 2.345        
cufflinks 1.179        
cufflinks 1.668        
cufflinks 1.332        
cufflinks 1.239        
cufflinks 1.091        
cufflinks 0.089       Low
cufflinks 1.057        
cufflinks 2.093        
cufflinks 1.578        
cufflinks 0.243       Low
cufflinks 2.162        
cufflinks 1.158        
cufflinks 0.763        
cufflinks 1.497        

0 Strain