Gene : Pp3c14_4050 P. patens v3.3
Defline:  (1 of 1) PTHR10192 - MOLYBDOPTERIN BIOSYNTHESIS PROTEIN Genomic Order:  178
Name:  ? Pp3c14_4050 Secondary Identifier:  ? PAC:32960090
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppatens PWY-6823 Physcomitrium patens pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c14_4050 0.5kb upstream 0.5kb upstream 6990 true Chr14: 2694847-2701836 Physcomitrium patens
Pp3c14_4050 0.5kb upstream 0.5kb upstream 500 false Chr14: 2694847-2695346 Physcomitrium patens
Pp3c14_4050 0.5kb downstream 0.5kb downstream 6990 true Chr14: 2695347-2702336 Physcomitrium patens
Pp3c14_4050 0.5kb downstream 0.5kb downstream 500 false Chr14: 2701837-2702336 Physcomitrium patens
Pp3c14_4050 1.0kb upstream 1.0kb upstream 7490 true Chr14: 2694347-2701836 Physcomitrium patens
Pp3c14_4050 1.0kb upstream 1.0kb upstream 1000 false Chr14: 2694347-2695346 Physcomitrium patens
Pp3c14_4050 1.0kb downstream 1.0kb downstream 7490 true Chr14: 2695347-2702836 Physcomitrium patens
Pp3c14_4050 1.0kb downstream 1.0kb downstream 1000 false Chr14: 2701837-2702836 Physcomitrium patens
Pp3c14_4050 2.0kb upstream 2.0kb upstream 8490 true Chr14: 2693347-2701836 Physcomitrium patens
Pp3c14_4050 2.0kb upstream 2.0kb upstream 2000 false Chr14: 2693347-2695346 Physcomitrium patens
Pp3c14_4050 2.0kb downstream 2.0kb downstream 8490 true Chr14: 2695347-2703836 Physcomitrium patens
Pp3c14_4050 2.0kb downstream 2.0kb downstream 2000 false Chr14: 2701837-2703836 Physcomitrium patens
Pp3c14_4050 5.0kb upstream 5.0kb upstream 11490 true Chr14: 2690347-2701836 Physcomitrium patens
Pp3c14_4050 5.0kb upstream 5.0kb upstream 5000 false Chr14: 2690347-2695346 Physcomitrium patens
Pp3c14_4050 5.0kb downstream 5.0kb downstream 11490 true Chr14: 2695347-2706836 Physcomitrium patens
Pp3c14_4050 5.0kb downstream 5.0kb downstream 5000 false Chr14: 2701837-2706836 Physcomitrium patens
Pp3c14_4050 10.0kb upstream 10.0kb upstream 16490 true Chr14: 2685347-2701836 Physcomitrium patens
Pp3c14_4050 10.0kb upstream 10.0kb upstream 10000 false Chr14: 2685347-2695346 Physcomitrium patens
Pp3c14_4050 10.0kb downstream 10.0kb downstream 16490 true Chr14: 2695347-2711836 Physcomitrium patens
Pp3c14_4050 10.0kb downstream 10.0kb downstream 10000 false Chr14: 2701837-2711836 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121347061 5274 Embryophyte View MSA
123428395 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 62.007     High  
cufflinks 61.998     High  
cufflinks 101.691     High  
cufflinks 100.785     High  
cufflinks 93.249     High  
cufflinks 73.468     High  
cufflinks 73.558     High  
cufflinks 67.963     High  
cufflinks 61.767     High  
cufflinks 97.037     High  
cufflinks 71.347     High  
cufflinks 106.177     High High
cufflinks 113.691     High High
cufflinks 74.408     High  
cufflinks 53.54     High  
cufflinks 55.109     High  
cufflinks 73.163     High  
cufflinks 33.336     High Low
cufflinks 64.005     High  
cufflinks 98.779     High  
cufflinks 43.295     High Low
cufflinks 39.861     High Low
cufflinks 99.539     High  
cufflinks 32.399     High Low
cufflinks 92.6     High  
cufflinks 61.297     High  
cufflinks 84.04     High  
cufflinks 99.191     High  
cufflinks 115.482     High High
cufflinks 91.495     High  

0 Strain