Gene : Pp3c14_5580 P. patens v3.3
Defline:  (1 of 2) PTHR15431 - FGFR1 ONCOGENE PARTNER/LISH DOMAIN-CONTAINING PROTEIN Genomic Order:  262
Name:  ? Pp3c14_5580 Secondary Identifier:  ? PAC:32960743
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c14_5580 0.5kb upstream 0.5kb upstream 6722 true Chr14: 3868932-3875653 Physcomitrium patens
Pp3c14_5580 0.5kb upstream 0.5kb upstream 500 false Chr14: 3875154-3875653 Physcomitrium patens
Pp3c14_5580 0.5kb downstream 0.5kb downstream 6722 true Chr14: 3868432-3875153 Physcomitrium patens
Pp3c14_5580 0.5kb downstream 0.5kb downstream 500 false Chr14: 3868432-3868931 Physcomitrium patens
Pp3c14_5580 1.0kb upstream 1.0kb upstream 7222 true Chr14: 3868932-3876153 Physcomitrium patens
Pp3c14_5580 1.0kb upstream 1.0kb upstream 1000 false Chr14: 3875154-3876153 Physcomitrium patens
Pp3c14_5580 1.0kb downstream 1.0kb downstream 7222 true Chr14: 3867932-3875153 Physcomitrium patens
Pp3c14_5580 1.0kb downstream 1.0kb downstream 1000 false Chr14: 3867932-3868931 Physcomitrium patens
Pp3c14_5580 2.0kb upstream 2.0kb upstream 8222 true Chr14: 3868932-3877153 Physcomitrium patens
Pp3c14_5580 2.0kb upstream 2.0kb upstream 2000 false Chr14: 3875154-3877153 Physcomitrium patens
Pp3c14_5580 2.0kb downstream 2.0kb downstream 8222 true Chr14: 3866932-3875153 Physcomitrium patens
Pp3c14_5580 2.0kb downstream 2.0kb downstream 2000 false Chr14: 3866932-3868931 Physcomitrium patens
Pp3c14_5580 5.0kb upstream 5.0kb upstream 11222 true Chr14: 3868932-3880153 Physcomitrium patens
Pp3c14_5580 5.0kb upstream 5.0kb upstream 5000 false Chr14: 3875154-3880153 Physcomitrium patens
Pp3c14_5580 5.0kb downstream 5.0kb downstream 11222 true Chr14: 3863932-3875153 Physcomitrium patens
Pp3c14_5580 5.0kb downstream 5.0kb downstream 5000 false Chr14: 3863932-3868931 Physcomitrium patens
Pp3c14_5580 10.0kb upstream 10.0kb upstream 16222 true Chr14: 3868932-3885153 Physcomitrium patens
Pp3c14_5580 10.0kb upstream 10.0kb upstream 10000 false Chr14: 3875154-3885153 Physcomitrium patens
Pp3c14_5580 10.0kb downstream 10.0kb downstream 16222 true Chr14: 3858932-3875153 Physcomitrium patens
Pp3c14_5580 10.0kb downstream 10.0kb downstream 10000 false Chr14: 3858932-3868931 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121351056 5274 Embryophyte View MSA
123427821 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 101.68     High  
cufflinks 50.938     High Low
cufflinks 122.485     High  
cufflinks 94.634     High  
cufflinks 137.972     High  
cufflinks 145.781     High High
cufflinks 135.131     High  
cufflinks 89.106     High  
cufflinks 163.427     High High
cufflinks 76.289     High  
cufflinks 80.291     High  
cufflinks 138.586     High  
cufflinks 119.581     High  
cufflinks 97.853     High  
cufflinks 163.277     High High
cufflinks 158.421     High High
cufflinks 87.589     High  
cufflinks 139.845     High  
cufflinks 77.771     High  
cufflinks 115.015     High  
cufflinks 167.83     High High
cufflinks 95.36     High  
cufflinks 169.081     High High
cufflinks 79.577     High  
cufflinks 92.973     High  
cufflinks 76.539     High  
cufflinks 55.282     High Low
cufflinks 106.574     High  
cufflinks 57.274     High Low
cufflinks 118.325     High  

0 Strain