Gene : Pp3c15_20810 P. patens v3.3
Defline:  (1 of 5) KOG0580 - Serine/threonine protein kinase Genomic Order:  944
Name:  ? Pp3c15_20810 Secondary Identifier:  ? PAC:32929741
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c15_20810 0.5kb upstream 0.5kb upstream 4413 true Chr15: 13512628-13517040 Physcomitrium patens
Pp3c15_20810 0.5kb upstream 0.5kb upstream 500 false Chr15: 13512628-13513127 Physcomitrium patens
Pp3c15_20810 0.5kb downstream 0.5kb downstream 4413 true Chr15: 13513128-13517540 Physcomitrium patens
Pp3c15_20810 0.5kb downstream 0.5kb downstream 500 false Chr15: 13517041-13517540 Physcomitrium patens
Pp3c15_20810 1.0kb upstream 1.0kb upstream 4913 true Chr15: 13512128-13517040 Physcomitrium patens
Pp3c15_20810 1.0kb upstream 1.0kb upstream 1000 false Chr15: 13512128-13513127 Physcomitrium patens
Pp3c15_20810 1.0kb downstream 1.0kb downstream 4913 true Chr15: 13513128-13518040 Physcomitrium patens
Pp3c15_20810 1.0kb downstream 1.0kb downstream 1000 false Chr15: 13517041-13518040 Physcomitrium patens
Pp3c15_20810 2.0kb upstream 2.0kb upstream 5913 true Chr15: 13511128-13517040 Physcomitrium patens
Pp3c15_20810 2.0kb upstream 2.0kb upstream 2000 false Chr15: 13511128-13513127 Physcomitrium patens
Pp3c15_20810 2.0kb downstream 2.0kb downstream 5913 true Chr15: 13513128-13519040 Physcomitrium patens
Pp3c15_20810 2.0kb downstream 2.0kb downstream 2000 false Chr15: 13517041-13519040 Physcomitrium patens
Pp3c15_20810 5.0kb upstream 5.0kb upstream 8913 true Chr15: 13508128-13517040 Physcomitrium patens
Pp3c15_20810 5.0kb upstream 5.0kb upstream 5000 false Chr15: 13508128-13513127 Physcomitrium patens
Pp3c15_20810 5.0kb downstream 5.0kb downstream 8913 true Chr15: 13513128-13522040 Physcomitrium patens
Pp3c15_20810 5.0kb downstream 5.0kb downstream 5000 false Chr15: 13517041-13522040 Physcomitrium patens
Pp3c15_20810 10.0kb upstream 10.0kb upstream 13913 true Chr15: 13503128-13517040 Physcomitrium patens
Pp3c15_20810 10.0kb upstream 10.0kb upstream 10000 false Chr15: 13503128-13513127 Physcomitrium patens
Pp3c15_20810 10.0kb downstream 10.0kb downstream 13913 true Chr15: 13513128-13527040 Physcomitrium patens
Pp3c15_20810 10.0kb downstream 10.0kb downstream 10000 false Chr15: 13517041-13527040 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343304 5274 Embryophyte View MSA
123379585 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.217        
cufflinks 1.981        
cufflinks 2.001        
cufflinks 1.102        
cufflinks 1.155        
cufflinks 0.535       Low
cufflinks 1.799        
cufflinks 2.0        
cufflinks 1.418        
cufflinks 1.852        
cufflinks 1.501        
cufflinks 1.992        
cufflinks 2.444       High
cufflinks 1.815        
cufflinks 1.591        
cufflinks 2.16        
cufflinks 1.168        
cufflinks 0.452       Low
cufflinks 1.366        
cufflinks 1.984        
cufflinks 1.311        
cufflinks 1.351        
cufflinks 1.787        
cufflinks 1.607        
cufflinks 2.281       High
cufflinks 0.514       Low
cufflinks 1.722        
cufflinks 1.575        
cufflinks 1.666        
cufflinks 1.622        

0 Strain