Gene : Pp3c15_19160 P. patens v3.3
Defline:  (1 of 2) PF00092//PF02743//PF07714 - von Willebrand factor type A domain (VWA) // Cache domain (Cache_1) // Protein tyrosine kinase (Pkinase_Tyr) Genomic Order:  863
Name:  ? Pp3c15_19160 Secondary Identifier:  ? PAC:32926470
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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7 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c15_19160 0.5kb upstream 0.5kb upstream 7594 true Chr15: 12642378-12649971 Physcomitrium patens
Pp3c15_19160 0.5kb upstream 0.5kb upstream 500 false Chr15: 12649472-12649971 Physcomitrium patens
Pp3c15_19160 0.5kb downstream 0.5kb downstream 7594 true Chr15: 12641878-12649471 Physcomitrium patens
Pp3c15_19160 0.5kb downstream 0.5kb downstream 500 false Chr15: 12641878-12642377 Physcomitrium patens
Pp3c15_19160 1.0kb upstream 1.0kb upstream 8094 true Chr15: 12642378-12650471 Physcomitrium patens
Pp3c15_19160 1.0kb upstream 1.0kb upstream 1000 false Chr15: 12649472-12650471 Physcomitrium patens
Pp3c15_19160 1.0kb downstream 1.0kb downstream 8094 true Chr15: 12641378-12649471 Physcomitrium patens
Pp3c15_19160 1.0kb downstream 1.0kb downstream 1000 false Chr15: 12641378-12642377 Physcomitrium patens
Pp3c15_19160 2.0kb upstream 2.0kb upstream 9094 true Chr15: 12642378-12651471 Physcomitrium patens
Pp3c15_19160 2.0kb upstream 2.0kb upstream 2000 false Chr15: 12649472-12651471 Physcomitrium patens
Pp3c15_19160 2.0kb downstream 2.0kb downstream 9094 true Chr15: 12640378-12649471 Physcomitrium patens
Pp3c15_19160 2.0kb downstream 2.0kb downstream 2000 false Chr15: 12640378-12642377 Physcomitrium patens
Pp3c15_19160 5.0kb upstream 5.0kb upstream 12094 true Chr15: 12642378-12654471 Physcomitrium patens
Pp3c15_19160 5.0kb upstream 5.0kb upstream 5000 false Chr15: 12649472-12654471 Physcomitrium patens
Pp3c15_19160 5.0kb downstream 5.0kb downstream 12094 true Chr15: 12637378-12649471 Physcomitrium patens
Pp3c15_19160 5.0kb downstream 5.0kb downstream 5000 false Chr15: 12637378-12642377 Physcomitrium patens
Pp3c15_19160 10.0kb upstream 10.0kb upstream 17094 true Chr15: 12642378-12659471 Physcomitrium patens
Pp3c15_19160 10.0kb upstream 10.0kb upstream 10000 false Chr15: 12649472-12659471 Physcomitrium patens
Pp3c15_19160 10.0kb downstream 10.0kb downstream 17094 true Chr15: 12632378-12649471 Physcomitrium patens
Pp3c15_19160 10.0kb downstream 10.0kb downstream 10000 false Chr15: 12632378-12642377 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121336397 5274 Embryophyte View MSA
123373229 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.225        
cufflinks 27.539     High  
cufflinks 48.153     High  
cufflinks 1.745       Low
cufflinks 46.496     High  
cufflinks 1.104       Low
cufflinks 36.729     High  
cufflinks 1.916       Low
cufflinks 5.934       Low
cufflinks 20.207     High  
cufflinks 189.57     High High
cufflinks 1.479       Low
cufflinks 31.189     High  
cufflinks 32.065     High  
cufflinks 37.94     High  
cufflinks 15.208        
cufflinks 2.989       Low
cufflinks 59.624     High  
cufflinks 72.166     High  
cufflinks 39.808     High  
cufflinks 32.555     High  
cufflinks 52.724     High  
cufflinks 57.78     High  
cufflinks 28.1     High  
cufflinks 30.112     High  
cufflinks 23.048     High  
cufflinks 32.043     High  
cufflinks 244.207     High High
cufflinks 69.363     High  
cufflinks 40.957     High  

0 Strain