Gene : Pp3c16_11480 P. patens v3.3
Defline:  (1 of 2) PF03735 - ENT domain (ENT) Genomic Order:  590
Name:  ? Pp3c16_11480 Secondary Identifier:  ? PAC:32984281
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c16_11480 0.5kb upstream 0.5kb upstream 5366 true Chr16: 7320340-7325705 Physcomitrium patens
Pp3c16_11480 0.5kb upstream 0.5kb upstream 500 false Chr16: 7320340-7320839 Physcomitrium patens
Pp3c16_11480 0.5kb downstream 0.5kb downstream 5366 true Chr16: 7320840-7326205 Physcomitrium patens
Pp3c16_11480 0.5kb downstream 0.5kb downstream 500 false Chr16: 7325706-7326205 Physcomitrium patens
Pp3c16_11480 1.0kb upstream 1.0kb upstream 5866 true Chr16: 7319840-7325705 Physcomitrium patens
Pp3c16_11480 1.0kb upstream 1.0kb upstream 1000 false Chr16: 7319840-7320839 Physcomitrium patens
Pp3c16_11480 1.0kb downstream 1.0kb downstream 5866 true Chr16: 7320840-7326705 Physcomitrium patens
Pp3c16_11480 1.0kb downstream 1.0kb downstream 1000 false Chr16: 7325706-7326705 Physcomitrium patens
Pp3c16_11480 2.0kb upstream 2.0kb upstream 6866 true Chr16: 7318840-7325705 Physcomitrium patens
Pp3c16_11480 2.0kb upstream 2.0kb upstream 2000 false Chr16: 7318840-7320839 Physcomitrium patens
Pp3c16_11480 2.0kb downstream 2.0kb downstream 6866 true Chr16: 7320840-7327705 Physcomitrium patens
Pp3c16_11480 2.0kb downstream 2.0kb downstream 2000 false Chr16: 7325706-7327705 Physcomitrium patens
Pp3c16_11480 5.0kb upstream 5.0kb upstream 9866 true Chr16: 7315840-7325705 Physcomitrium patens
Pp3c16_11480 5.0kb upstream 5.0kb upstream 5000 false Chr16: 7315840-7320839 Physcomitrium patens
Pp3c16_11480 5.0kb downstream 5.0kb downstream 9866 true Chr16: 7320840-7330705 Physcomitrium patens
Pp3c16_11480 5.0kb downstream 5.0kb downstream 5000 false Chr16: 7325706-7330705 Physcomitrium patens
Pp3c16_11480 10.0kb upstream 10.0kb upstream 14866 true Chr16: 7310840-7325705 Physcomitrium patens
Pp3c16_11480 10.0kb upstream 10.0kb upstream 10000 false Chr16: 7310840-7320839 Physcomitrium patens
Pp3c16_11480 10.0kb downstream 10.0kb downstream 14866 true Chr16: 7320840-7335705 Physcomitrium patens
Pp3c16_11480 10.0kb downstream 10.0kb downstream 10000 false Chr16: 7325706-7335705 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121351080 5274 Embryophyte View MSA
123428685 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.676     High High
cufflinks 27.397     High  
cufflinks 25.214     High  
cufflinks 11.786       Low
cufflinks 30.809     High  
cufflinks 25.287     High  
cufflinks 33.176     High  
cufflinks 29.58     High  
cufflinks 23.776     High  
cufflinks 23.467     High  
cufflinks 35.784     High  
cufflinks 30.198     High  
cufflinks 25.217     High  
cufflinks 25.642     High  
cufflinks 19.203     High Low
cufflinks 44.903     High High
cufflinks 28.494     High  
cufflinks 26.74     High  
cufflinks 29.643     High  
cufflinks 27.939     High  
cufflinks 27.347     High  
cufflinks 24.876     High  
cufflinks 28.563     High  
cufflinks 16.059       Low
cufflinks 48.565     High High
cufflinks 24.201     High  
cufflinks 25.376     High  
cufflinks 29.65     High  
cufflinks 20.156     High  
cufflinks 23.007     High  

0 Strain