Gene : Pp3c16_7170 P. patens v3.3
Defline:  (1 of 1) PTHR24221:SF169 - ABC TRANSPORTER B FAMILY MEMBER 28 Genomic Order:  364
Name:  ? Pp3c16_7170 Secondary Identifier:  ? PAC:32984920
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c16_7170 0.5kb upstream 0.5kb upstream 6996 true Chr16: 4471189-4478184 Physcomitrium patens
Pp3c16_7170 0.5kb upstream 0.5kb upstream 500 false Chr16: 4471189-4471688 Physcomitrium patens
Pp3c16_7170 0.5kb downstream 0.5kb downstream 6996 true Chr16: 4471689-4478684 Physcomitrium patens
Pp3c16_7170 0.5kb downstream 0.5kb downstream 500 false Chr16: 4478185-4478684 Physcomitrium patens
Pp3c16_7170 1.0kb upstream 1.0kb upstream 7496 true Chr16: 4470689-4478184 Physcomitrium patens
Pp3c16_7170 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4470689-4471688 Physcomitrium patens
Pp3c16_7170 1.0kb downstream 1.0kb downstream 7496 true Chr16: 4471689-4479184 Physcomitrium patens
Pp3c16_7170 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4478185-4479184 Physcomitrium patens
Pp3c16_7170 2.0kb upstream 2.0kb upstream 8496 true Chr16: 4469689-4478184 Physcomitrium patens
Pp3c16_7170 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4469689-4471688 Physcomitrium patens
Pp3c16_7170 2.0kb downstream 2.0kb downstream 8496 true Chr16: 4471689-4480184 Physcomitrium patens
Pp3c16_7170 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4478185-4480184 Physcomitrium patens
Pp3c16_7170 5.0kb upstream 5.0kb upstream 11496 true Chr16: 4466689-4478184 Physcomitrium patens
Pp3c16_7170 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4466689-4471688 Physcomitrium patens
Pp3c16_7170 5.0kb downstream 5.0kb downstream 11496 true Chr16: 4471689-4483184 Physcomitrium patens
Pp3c16_7170 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4478185-4483184 Physcomitrium patens
Pp3c16_7170 10.0kb upstream 10.0kb upstream 16496 true Chr16: 4461689-4478184 Physcomitrium patens
Pp3c16_7170 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4461689-4471688 Physcomitrium patens
Pp3c16_7170 10.0kb downstream 10.0kb downstream 16496 true Chr16: 4471689-4488184 Physcomitrium patens
Pp3c16_7170 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4478185-4488184 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123429075 5275 Viridiplantae View MSA
121345640 5274 Embryophyte View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 73.629     High High
cufflinks 33.59     High  
cufflinks 36.192     High  
cufflinks 26.392     High  
cufflinks 29.112     High  
cufflinks 26.26     High  
cufflinks 21.031     High  
cufflinks 21.927        
cufflinks 30.746     High  
cufflinks 38.896     High  
cufflinks 57.429     High High
cufflinks 20.03     High Low
cufflinks 25.333     High  
cufflinks 24.741     High  
cufflinks 24.804     High  
cufflinks 22.269     High  
cufflinks 9.448       Low
cufflinks 17.165       Low
cufflinks 25.306     High  
cufflinks 59.924     High High
cufflinks 39.486     High  
cufflinks 43.278     High  
cufflinks 17.755       Low
cufflinks 31.161     High  
cufflinks 33.776     High  
cufflinks 35.0     High  
cufflinks 35.406     High  
cufflinks 55.582     High High
cufflinks 40.868     High  
cufflinks 51.789     High High

0 Strain