Gene : Pp3c16_25870 P. patens v3.3
Defline:  (1 of 1) PTHR12280//PTHR12280:SF31 - PANTOTHENATE KINASE Genomic Order:  1252
Name:  ? Pp3c16_25870 Secondary Identifier:  ? PAC:32985642
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c16_25870 0.5kb upstream 0.5kb upstream 5857 true Chr16: 16332265-16338121 Physcomitrium patens
Pp3c16_25870 0.5kb upstream 0.5kb upstream 500 false Chr16: 16337622-16338121 Physcomitrium patens
Pp3c16_25870 0.5kb downstream 0.5kb downstream 5857 true Chr16: 16331765-16337621 Physcomitrium patens
Pp3c16_25870 0.5kb downstream 0.5kb downstream 500 false Chr16: 16331765-16332264 Physcomitrium patens
Pp3c16_25870 1.0kb upstream 1.0kb upstream 6357 true Chr16: 16332265-16338621 Physcomitrium patens
Pp3c16_25870 1.0kb upstream 1.0kb upstream 1000 false Chr16: 16337622-16338621 Physcomitrium patens
Pp3c16_25870 1.0kb downstream 1.0kb downstream 6357 true Chr16: 16331265-16337621 Physcomitrium patens
Pp3c16_25870 1.0kb downstream 1.0kb downstream 1000 false Chr16: 16331265-16332264 Physcomitrium patens
Pp3c16_25870 2.0kb upstream 2.0kb upstream 7357 true Chr16: 16332265-16339621 Physcomitrium patens
Pp3c16_25870 2.0kb upstream 2.0kb upstream 2000 false Chr16: 16337622-16339621 Physcomitrium patens
Pp3c16_25870 2.0kb downstream 2.0kb downstream 7357 true Chr16: 16330265-16337621 Physcomitrium patens
Pp3c16_25870 2.0kb downstream 2.0kb downstream 2000 false Chr16: 16330265-16332264 Physcomitrium patens
Pp3c16_25870 5.0kb upstream 5.0kb upstream 10357 true Chr16: 16332265-16342621 Physcomitrium patens
Pp3c16_25870 5.0kb upstream 5.0kb upstream 5000 false Chr16: 16337622-16342621 Physcomitrium patens
Pp3c16_25870 5.0kb downstream 5.0kb downstream 10357 true Chr16: 16327265-16337621 Physcomitrium patens
Pp3c16_25870 5.0kb downstream 5.0kb downstream 5000 false Chr16: 16327265-16332264 Physcomitrium patens
Pp3c16_25870 10.0kb upstream 10.0kb upstream 15357 true Chr16: 16332265-16347621 Physcomitrium patens
Pp3c16_25870 10.0kb upstream 10.0kb upstream 10000 false Chr16: 16337622-16347621 Physcomitrium patens
Pp3c16_25870 10.0kb downstream 10.0kb downstream 15357 true Chr16: 16322265-16337621 Physcomitrium patens
Pp3c16_25870 10.0kb downstream 10.0kb downstream 10000 false Chr16: 16322265-16332264 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343944 5274 Embryophyte View MSA
123428038 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 503.017     High  
cufflinks 1181.06     High High
cufflinks 263.29     High Low
cufflinks 1006.87     High High
cufflinks 358.561     High Low
cufflinks 931.81     High High
cufflinks 288.447     High Low
cufflinks 551.61     High  
cufflinks 368.476     High  
cufflinks 550.72     High  
cufflinks 744.594     High  
cufflinks 435.696     High  
cufflinks 284.46     High Low
cufflinks 744.852     High  
cufflinks 717.015     High  
cufflinks 644.341     High  
cufflinks 553.202     High  
cufflinks 578.478     High  
cufflinks 571.435     High  
cufflinks 576.663     High  
cufflinks 308.873     High Low
cufflinks 597.426     High  
cufflinks 378.992     High  
cufflinks 1219.63     High High
cufflinks 389.313     High  
cufflinks 561.624     High  
cufflinks 514.339     High  
cufflinks 489.751     High  
cufflinks 697.68     High  
cufflinks 589.473     High  

0 Strain