Gene : Pp3c17_10270 P. patens v3.3
Defline:  (1 of 4) 2.4.2.29 - tRNA-guanine(34) transglycosylase / tRNA transglycosylase Genomic Order:  449
Name:  ? Pp3c17_10270 Secondary Identifier:  ? PAC:32908399
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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10 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c17_10270 0.5kb upstream 0.5kb upstream 5322 true Chr17: 7246921-7252242 Physcomitrium patens
Pp3c17_10270 0.5kb upstream 0.5kb upstream 500 false Chr17: 7246921-7247420 Physcomitrium patens
Pp3c17_10270 0.5kb downstream 0.5kb downstream 5322 true Chr17: 7247421-7252742 Physcomitrium patens
Pp3c17_10270 0.5kb downstream 0.5kb downstream 500 false Chr17: 7252243-7252742 Physcomitrium patens
Pp3c17_10270 1.0kb upstream 1.0kb upstream 5822 true Chr17: 7246421-7252242 Physcomitrium patens
Pp3c17_10270 1.0kb upstream 1.0kb upstream 1000 false Chr17: 7246421-7247420 Physcomitrium patens
Pp3c17_10270 1.0kb downstream 1.0kb downstream 5822 true Chr17: 7247421-7253242 Physcomitrium patens
Pp3c17_10270 1.0kb downstream 1.0kb downstream 1000 false Chr17: 7252243-7253242 Physcomitrium patens
Pp3c17_10270 2.0kb upstream 2.0kb upstream 6822 true Chr17: 7245421-7252242 Physcomitrium patens
Pp3c17_10270 2.0kb upstream 2.0kb upstream 2000 false Chr17: 7245421-7247420 Physcomitrium patens
Pp3c17_10270 2.0kb downstream 2.0kb downstream 6822 true Chr17: 7247421-7254242 Physcomitrium patens
Pp3c17_10270 2.0kb downstream 2.0kb downstream 2000 false Chr17: 7252243-7254242 Physcomitrium patens
Pp3c17_10270 5.0kb upstream 5.0kb upstream 9822 true Chr17: 7242421-7252242 Physcomitrium patens
Pp3c17_10270 5.0kb upstream 5.0kb upstream 5000 false Chr17: 7242421-7247420 Physcomitrium patens
Pp3c17_10270 5.0kb downstream 5.0kb downstream 9822 true Chr17: 7247421-7257242 Physcomitrium patens
Pp3c17_10270 5.0kb downstream 5.0kb downstream 5000 false Chr17: 7252243-7257242 Physcomitrium patens
Pp3c17_10270 10.0kb upstream 10.0kb upstream 14822 true Chr17: 7237421-7252242 Physcomitrium patens
Pp3c17_10270 10.0kb upstream 10.0kb upstream 10000 false Chr17: 7237421-7247420 Physcomitrium patens
Pp3c17_10270 10.0kb downstream 10.0kb downstream 14822 true Chr17: 7247421-7262242 Physcomitrium patens
Pp3c17_10270 10.0kb downstream 10.0kb downstream 10000 false Chr17: 7252243-7262242 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121348371 5274 Embryophyte View MSA
123426152 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.674        
cufflinks 0.48       Low
cufflinks 0.929        
cufflinks 0.797        
cufflinks 1.228       High
cufflinks 0.669        
cufflinks 1.357       High
cufflinks 1.064        
cufflinks 0.681        
cufflinks 0.648        
cufflinks 0.893        
cufflinks 1.066        
cufflinks 0.344       Low
cufflinks 0.789        
cufflinks 1.406       High
cufflinks 0.592        
cufflinks 0.985        
cufflinks 0.492       Low
cufflinks 0.983        
cufflinks 0.968        
cufflinks 0.56       Low
cufflinks 1.092        
cufflinks 1.302       High
cufflinks 0.831        
cufflinks 0.531       Low
cufflinks 0.712        
cufflinks 0.948        
cufflinks 0.718        
cufflinks 0.711        
cufflinks 0.74        

0 Strain