Gene : Pp3c17_13270 P. patens v3.3
Defline:  (1 of 4) PTHR11214:SF74 - BETA-1,3-GALACTOSYLTRANSFERASE 7-RELATED Genomic Order:  575
Name:  ? Pp3c17_13270 Secondary Identifier:  ? PAC:32907115
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c17_13270 0.5kb upstream 0.5kb upstream 3712 true Chr17: 9310933-9314644 Physcomitrium patens
Pp3c17_13270 0.5kb upstream 0.5kb upstream 500 false Chr17: 9314145-9314644 Physcomitrium patens
Pp3c17_13270 0.5kb downstream 0.5kb downstream 3712 true Chr17: 9310433-9314144 Physcomitrium patens
Pp3c17_13270 0.5kb downstream 0.5kb downstream 500 false Chr17: 9310433-9310932 Physcomitrium patens
Pp3c17_13270 1.0kb upstream 1.0kb upstream 4212 true Chr17: 9310933-9315144 Physcomitrium patens
Pp3c17_13270 1.0kb upstream 1.0kb upstream 1000 false Chr17: 9314145-9315144 Physcomitrium patens
Pp3c17_13270 1.0kb downstream 1.0kb downstream 4212 true Chr17: 9309933-9314144 Physcomitrium patens
Pp3c17_13270 1.0kb downstream 1.0kb downstream 1000 false Chr17: 9309933-9310932 Physcomitrium patens
Pp3c17_13270 2.0kb upstream 2.0kb upstream 5212 true Chr17: 9310933-9316144 Physcomitrium patens
Pp3c17_13270 2.0kb upstream 2.0kb upstream 2000 false Chr17: 9314145-9316144 Physcomitrium patens
Pp3c17_13270 2.0kb downstream 2.0kb downstream 5212 true Chr17: 9308933-9314144 Physcomitrium patens
Pp3c17_13270 2.0kb downstream 2.0kb downstream 2000 false Chr17: 9308933-9310932 Physcomitrium patens
Pp3c17_13270 5.0kb upstream 5.0kb upstream 8212 true Chr17: 9310933-9319144 Physcomitrium patens
Pp3c17_13270 5.0kb upstream 5.0kb upstream 5000 false Chr17: 9314145-9319144 Physcomitrium patens
Pp3c17_13270 5.0kb downstream 5.0kb downstream 8212 true Chr17: 9305933-9314144 Physcomitrium patens
Pp3c17_13270 5.0kb downstream 5.0kb downstream 5000 false Chr17: 9305933-9310932 Physcomitrium patens
Pp3c17_13270 10.0kb upstream 10.0kb upstream 13212 true Chr17: 9310933-9324144 Physcomitrium patens
Pp3c17_13270 10.0kb upstream 10.0kb upstream 10000 false Chr17: 9314145-9324144 Physcomitrium patens
Pp3c17_13270 10.0kb downstream 10.0kb downstream 13212 true Chr17: 9300933-9314144 Physcomitrium patens
Pp3c17_13270 10.0kb downstream 10.0kb downstream 10000 false Chr17: 9300933-9310932 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121349235 5274 Embryophyte View MSA
123381228 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.57       Low
cufflinks 2.932        
cufflinks 1.505       Low
cufflinks 4.436        
cufflinks 3.628        
cufflinks 4.934        
cufflinks 14.046       High
cufflinks 1.992        
cufflinks 6.654       High
cufflinks 2.424        
cufflinks 2.961        
cufflinks 2.455        
cufflinks 2.004        
cufflinks 2.683        
cufflinks 2.107        
cufflinks 3.522        
cufflinks 3.031        
cufflinks 1.581       Low
cufflinks 16.169       High
cufflinks 2.91        
cufflinks 2.657        
cufflinks 1.996        
cufflinks 2.986        
cufflinks 5.037        
cufflinks 1.644       Low
cufflinks 2.31        
cufflinks 8.303       High
cufflinks 2.151        
cufflinks 5.088        
cufflinks 4.32        

0 Strain