Gene : Pp3c17_4710 P. patens v3.3
Defline:  (1 of 1) PTHR10516:SF323 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC Genomic Order:  184
Name:  ? Pp3c17_4710 Secondary Identifier:  ? PAC:32907870
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c17_4710 0.5kb upstream 0.5kb upstream 4176 true Chr17: 3742818-3746993 Physcomitrium patens
Pp3c17_4710 0.5kb upstream 0.5kb upstream 500 false Chr17: 3746494-3746993 Physcomitrium patens
Pp3c17_4710 0.5kb downstream 0.5kb downstream 4176 true Chr17: 3742318-3746493 Physcomitrium patens
Pp3c17_4710 0.5kb downstream 0.5kb downstream 500 false Chr17: 3742318-3742817 Physcomitrium patens
Pp3c17_4710 1.0kb upstream 1.0kb upstream 4676 true Chr17: 3742818-3747493 Physcomitrium patens
Pp3c17_4710 1.0kb upstream 1.0kb upstream 1000 false Chr17: 3746494-3747493 Physcomitrium patens
Pp3c17_4710 1.0kb downstream 1.0kb downstream 4676 true Chr17: 3741818-3746493 Physcomitrium patens
Pp3c17_4710 1.0kb downstream 1.0kb downstream 1000 false Chr17: 3741818-3742817 Physcomitrium patens
Pp3c17_4710 2.0kb upstream 2.0kb upstream 5676 true Chr17: 3742818-3748493 Physcomitrium patens
Pp3c17_4710 2.0kb upstream 2.0kb upstream 2000 false Chr17: 3746494-3748493 Physcomitrium patens
Pp3c17_4710 2.0kb downstream 2.0kb downstream 5676 true Chr17: 3740818-3746493 Physcomitrium patens
Pp3c17_4710 2.0kb downstream 2.0kb downstream 2000 false Chr17: 3740818-3742817 Physcomitrium patens
Pp3c17_4710 5.0kb upstream 5.0kb upstream 8676 true Chr17: 3742818-3751493 Physcomitrium patens
Pp3c17_4710 5.0kb upstream 5.0kb upstream 5000 false Chr17: 3746494-3751493 Physcomitrium patens
Pp3c17_4710 5.0kb downstream 5.0kb downstream 8676 true Chr17: 3737818-3746493 Physcomitrium patens
Pp3c17_4710 5.0kb downstream 5.0kb downstream 5000 false Chr17: 3737818-3742817 Physcomitrium patens
Pp3c17_4710 10.0kb upstream 10.0kb upstream 13676 true Chr17: 3742818-3756493 Physcomitrium patens
Pp3c17_4710 10.0kb upstream 10.0kb upstream 10000 false Chr17: 3746494-3756493 Physcomitrium patens
Pp3c17_4710 10.0kb downstream 10.0kb downstream 13676 true Chr17: 3732818-3746493 Physcomitrium patens
Pp3c17_4710 10.0kb downstream 10.0kb downstream 10000 false Chr17: 3732818-3742817 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121347263 5274 Embryophyte View MSA
123426566 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.981        
cufflinks 4.712        
cufflinks 5.875        
cufflinks 5.882        
cufflinks 1.566        
cufflinks 4.022        
cufflinks 3.873        
cufflinks 6.256        
cufflinks 8.339        
cufflinks 4.524        
cufflinks 0.098       Low
cufflinks 5.429        
cufflinks 3.628        
cufflinks 0.236       Low
cufflinks 4.23        
cufflinks 0.423       Low
cufflinks 9.882        
cufflinks 0.766       Low
cufflinks 10.092        
cufflinks 9.435        
cufflinks 6.006        
cufflinks 3.77        
cufflinks 0.122       Low
cufflinks 6.162        
cufflinks 0.361       Low
cufflinks 2.85        
cufflinks 8.889        
cufflinks 5.396        
cufflinks 4.59        
cufflinks 2.877        

0 Strain