Gene : Pp3c17_21830 P. patens v3.3
Defline:  (1 of 2) PTHR23115:SF13 - ELONGATION FACTOR TU GTP-BINDING DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  1034
Name:  ? Pp3c17_21830 Secondary Identifier:  ? PAC:32905745
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c17_21830 0.5kb upstream 0.5kb upstream 5396 true Chr17: 14299663-14305058 Physcomitrium patens
Pp3c17_21830 0.5kb upstream 0.5kb upstream 500 false Chr17: 14299663-14300162 Physcomitrium patens
Pp3c17_21830 0.5kb downstream 0.5kb downstream 5396 true Chr17: 14300163-14305558 Physcomitrium patens
Pp3c17_21830 0.5kb downstream 0.5kb downstream 500 false Chr17: 14305059-14305558 Physcomitrium patens
Pp3c17_21830 1.0kb upstream 1.0kb upstream 5896 true Chr17: 14299163-14305058 Physcomitrium patens
Pp3c17_21830 1.0kb upstream 1.0kb upstream 1000 false Chr17: 14299163-14300162 Physcomitrium patens
Pp3c17_21830 1.0kb downstream 1.0kb downstream 5896 true Chr17: 14300163-14306058 Physcomitrium patens
Pp3c17_21830 1.0kb downstream 1.0kb downstream 1000 false Chr17: 14305059-14306058 Physcomitrium patens
Pp3c17_21830 2.0kb upstream 2.0kb upstream 6896 true Chr17: 14298163-14305058 Physcomitrium patens
Pp3c17_21830 2.0kb upstream 2.0kb upstream 2000 false Chr17: 14298163-14300162 Physcomitrium patens
Pp3c17_21830 2.0kb downstream 2.0kb downstream 6896 true Chr17: 14300163-14307058 Physcomitrium patens
Pp3c17_21830 2.0kb downstream 2.0kb downstream 2000 false Chr17: 14305059-14307058 Physcomitrium patens
Pp3c17_21830 5.0kb upstream 5.0kb upstream 9896 true Chr17: 14295163-14305058 Physcomitrium patens
Pp3c17_21830 5.0kb upstream 5.0kb upstream 5000 false Chr17: 14295163-14300162 Physcomitrium patens
Pp3c17_21830 5.0kb downstream 5.0kb downstream 9896 true Chr17: 14300163-14310058 Physcomitrium patens
Pp3c17_21830 5.0kb downstream 5.0kb downstream 5000 false Chr17: 14305059-14310058 Physcomitrium patens
Pp3c17_21830 10.0kb upstream 10.0kb upstream 14896 true Chr17: 14290163-14305058 Physcomitrium patens
Pp3c17_21830 10.0kb upstream 10.0kb upstream 10000 false Chr17: 14290163-14300162 Physcomitrium patens
Pp3c17_21830 10.0kb downstream 10.0kb downstream 14896 true Chr17: 14300163-14315058 Physcomitrium patens
Pp3c17_21830 10.0kb downstream 10.0kb downstream 10000 false Chr17: 14305059-14315058 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121346138 5274 Embryophyte View MSA
123424452 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 148.078     High High
cufflinks 135.094     High High
cufflinks 98.243     High  
cufflinks 69.552     High  
cufflinks 67.24     High  
cufflinks 25.337     High Low
cufflinks 92.665     High  
cufflinks 61.542     High  
cufflinks 138.309     High High
cufflinks 107.346     High  
cufflinks 99.605     High  
cufflinks 123.316     High  
cufflinks 61.05     High  
cufflinks 69.344     High  
cufflinks 60.731     High  
cufflinks 78.391     High  
cufflinks 85.243     High  
cufflinks 70.867     High  
cufflinks 75.265     High  
cufflinks 117.299     High  
cufflinks 128.835     High High
cufflinks 98.941     High  
cufflinks 95.138     High  
cufflinks 105.763     High  
cufflinks 105.382     High  
cufflinks 141.295     High High
cufflinks 70.64     High  
cufflinks 59.372     High Low
cufflinks 62.474     High  
cufflinks 87.244     High  

0 Strain