Gene : Pp3c17_6000 P. patens v3.3
Genomic Order:  250 Name:  ? Pp3c17_6000
Secondary Identifier:  ? PAC:32907125
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c17_6000 0.5kb upstream 0.5kb upstream 5660 true Chr17: 4510300-4515959 Physcomitrium patens
Pp3c17_6000 0.5kb upstream 0.5kb upstream 500 false Chr17: 4515460-4515959 Physcomitrium patens
Pp3c17_6000 0.5kb downstream 0.5kb downstream 5660 true Chr17: 4509800-4515459 Physcomitrium patens
Pp3c17_6000 0.5kb downstream 0.5kb downstream 500 false Chr17: 4509800-4510299 Physcomitrium patens
Pp3c17_6000 1.0kb upstream 1.0kb upstream 6160 true Chr17: 4510300-4516459 Physcomitrium patens
Pp3c17_6000 1.0kb upstream 1.0kb upstream 1000 false Chr17: 4515460-4516459 Physcomitrium patens
Pp3c17_6000 1.0kb downstream 1.0kb downstream 6160 true Chr17: 4509300-4515459 Physcomitrium patens
Pp3c17_6000 1.0kb downstream 1.0kb downstream 1000 false Chr17: 4509300-4510299 Physcomitrium patens
Pp3c17_6000 2.0kb upstream 2.0kb upstream 7160 true Chr17: 4510300-4517459 Physcomitrium patens
Pp3c17_6000 2.0kb upstream 2.0kb upstream 2000 false Chr17: 4515460-4517459 Physcomitrium patens
Pp3c17_6000 2.0kb downstream 2.0kb downstream 7160 true Chr17: 4508300-4515459 Physcomitrium patens
Pp3c17_6000 2.0kb downstream 2.0kb downstream 2000 false Chr17: 4508300-4510299 Physcomitrium patens
Pp3c17_6000 5.0kb upstream 5.0kb upstream 10160 true Chr17: 4510300-4520459 Physcomitrium patens
Pp3c17_6000 5.0kb upstream 5.0kb upstream 5000 false Chr17: 4515460-4520459 Physcomitrium patens
Pp3c17_6000 5.0kb downstream 5.0kb downstream 10160 true Chr17: 4505300-4515459 Physcomitrium patens
Pp3c17_6000 5.0kb downstream 5.0kb downstream 5000 false Chr17: 4505300-4510299 Physcomitrium patens
Pp3c17_6000 10.0kb upstream 10.0kb upstream 15160 true Chr17: 4510300-4525459 Physcomitrium patens
Pp3c17_6000 10.0kb upstream 10.0kb upstream 10000 false Chr17: 4515460-4525459 Physcomitrium patens
Pp3c17_6000 10.0kb downstream 10.0kb downstream 15160 true Chr17: 4500300-4515459 Physcomitrium patens
Pp3c17_6000 10.0kb downstream 10.0kb downstream 10000 false Chr17: 4500300-4510299 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343044 5274 Embryophyte View MSA
123379399 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.353        
cufflinks 3.207        
cufflinks 3.348        
cufflinks 3.127        
cufflinks 4.543        
cufflinks 3.572        
cufflinks 3.397        
cufflinks 3.086        
cufflinks 8.734       High
cufflinks 4.008        
cufflinks 3.872        
cufflinks 7.946       High
cufflinks 3.606        
cufflinks 2.691        
cufflinks 3.346        
cufflinks 1.97       Low
cufflinks 5.144       High
cufflinks 3.539        
cufflinks 2.568        
cufflinks 2.19        
cufflinks 8.031       High
cufflinks 2.083       Low
cufflinks 3.296        
cufflinks 3.163        
cufflinks 1.203       Low
cufflinks 3.536        
cufflinks 1.423       Low
cufflinks 3.207        
cufflinks 2.338        
cufflinks 3.982        

0 Strain