Gene : Pp3c17_9970 P. patens v3.3
Genomic Order:  431 Name:  ? Pp3c17_9970
Secondary Identifier:  ? PAC:32905688
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c17_9970 0.5kb upstream 0.5kb upstream 1786 true Chr17: 7120532-7122317 Physcomitrium patens
Pp3c17_9970 0.5kb upstream 0.5kb upstream 500 false Chr17: 7121818-7122317 Physcomitrium patens
Pp3c17_9970 0.5kb downstream 0.5kb downstream 1786 true Chr17: 7120032-7121817 Physcomitrium patens
Pp3c17_9970 0.5kb downstream 0.5kb downstream 500 false Chr17: 7120032-7120531 Physcomitrium patens
Pp3c17_9970 1.0kb upstream 1.0kb upstream 2286 true Chr17: 7120532-7122817 Physcomitrium patens
Pp3c17_9970 1.0kb upstream 1.0kb upstream 1000 false Chr17: 7121818-7122817 Physcomitrium patens
Pp3c17_9970 1.0kb downstream 1.0kb downstream 2286 true Chr17: 7119532-7121817 Physcomitrium patens
Pp3c17_9970 1.0kb downstream 1.0kb downstream 1000 false Chr17: 7119532-7120531 Physcomitrium patens
Pp3c17_9970 2.0kb upstream 2.0kb upstream 3286 true Chr17: 7120532-7123817 Physcomitrium patens
Pp3c17_9970 2.0kb upstream 2.0kb upstream 2000 false Chr17: 7121818-7123817 Physcomitrium patens
Pp3c17_9970 2.0kb downstream 2.0kb downstream 3286 true Chr17: 7118532-7121817 Physcomitrium patens
Pp3c17_9970 2.0kb downstream 2.0kb downstream 2000 false Chr17: 7118532-7120531 Physcomitrium patens
Pp3c17_9970 5.0kb upstream 5.0kb upstream 6286 true Chr17: 7120532-7126817 Physcomitrium patens
Pp3c17_9970 5.0kb upstream 5.0kb upstream 5000 false Chr17: 7121818-7126817 Physcomitrium patens
Pp3c17_9970 5.0kb downstream 5.0kb downstream 6286 true Chr17: 7115532-7121817 Physcomitrium patens
Pp3c17_9970 5.0kb downstream 5.0kb downstream 5000 false Chr17: 7115532-7120531 Physcomitrium patens
Pp3c17_9970 10.0kb upstream 10.0kb upstream 11286 true Chr17: 7120532-7131817 Physcomitrium patens
Pp3c17_9970 10.0kb upstream 10.0kb upstream 10000 false Chr17: 7121818-7131817 Physcomitrium patens
Pp3c17_9970 10.0kb downstream 10.0kb downstream 11286 true Chr17: 7110532-7121817 Physcomitrium patens
Pp3c17_9970 10.0kb downstream 10.0kb downstream 10000 false Chr17: 7110532-7120531 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121325798 5274 Embryophyte Singleton cluster - no MSA
123362854 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain