Gene : Pp3c18_14380 P. patens v3.3
Defline:  (1 of 3) 3.4.24.85 - S2P endopeptidase / Sterol-regulatory element-binding proteins intramembrane protease Genomic Order:  571
Name:  ? Pp3c18_14380 Secondary Identifier:  ? PAC:32983470
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c18_14380 0.5kb upstream 0.5kb upstream 2648 true Chr18: 10386479-10389126 Physcomitrium patens
Pp3c18_14380 0.5kb upstream 0.5kb upstream 500 false Chr18: 10386479-10386978 Physcomitrium patens
Pp3c18_14380 0.5kb downstream 0.5kb downstream 2648 true Chr18: 10386979-10389626 Physcomitrium patens
Pp3c18_14380 0.5kb downstream 0.5kb downstream 500 false Chr18: 10389127-10389626 Physcomitrium patens
Pp3c18_14380 1.0kb upstream 1.0kb upstream 3148 true Chr18: 10385979-10389126 Physcomitrium patens
Pp3c18_14380 1.0kb upstream 1.0kb upstream 1000 false Chr18: 10385979-10386978 Physcomitrium patens
Pp3c18_14380 1.0kb downstream 1.0kb downstream 3148 true Chr18: 10386979-10390126 Physcomitrium patens
Pp3c18_14380 1.0kb downstream 1.0kb downstream 1000 false Chr18: 10389127-10390126 Physcomitrium patens
Pp3c18_14380 2.0kb upstream 2.0kb upstream 4148 true Chr18: 10384979-10389126 Physcomitrium patens
Pp3c18_14380 2.0kb upstream 2.0kb upstream 2000 false Chr18: 10384979-10386978 Physcomitrium patens
Pp3c18_14380 2.0kb downstream 2.0kb downstream 4148 true Chr18: 10386979-10391126 Physcomitrium patens
Pp3c18_14380 2.0kb downstream 2.0kb downstream 2000 false Chr18: 10389127-10391126 Physcomitrium patens
Pp3c18_14380 5.0kb upstream 5.0kb upstream 7148 true Chr18: 10381979-10389126 Physcomitrium patens
Pp3c18_14380 5.0kb upstream 5.0kb upstream 5000 false Chr18: 10381979-10386978 Physcomitrium patens
Pp3c18_14380 5.0kb downstream 5.0kb downstream 7148 true Chr18: 10386979-10394126 Physcomitrium patens
Pp3c18_14380 5.0kb downstream 5.0kb downstream 5000 false Chr18: 10389127-10394126 Physcomitrium patens
Pp3c18_14380 10.0kb upstream 10.0kb upstream 12148 true Chr18: 10376979-10389126 Physcomitrium patens
Pp3c18_14380 10.0kb upstream 10.0kb upstream 10000 false Chr18: 10376979-10386978 Physcomitrium patens
Pp3c18_14380 10.0kb downstream 10.0kb downstream 12148 true Chr18: 10386979-10399126 Physcomitrium patens
Pp3c18_14380 10.0kb downstream 10.0kb downstream 10000 false Chr18: 10389127-10399126 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121347975 5274 Embryophyte View MSA
123424345 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.981        
cufflinks 0.809        
cufflinks 0.857        
cufflinks 0.705        
cufflinks 0.99        
cufflinks 0.659       Low
cufflinks 0.834        
cufflinks 1.141       High
cufflinks 0.552       Low
cufflinks 0.648       Low
cufflinks 1.083        
cufflinks 0.783        
cufflinks 0.694       Low
cufflinks 1.213       High
cufflinks 0.892        
cufflinks 0.942        
cufflinks 1.015        
cufflinks 0.763        
cufflinks 0.747        
cufflinks 0.89        
cufflinks 1.417       High
cufflinks 1.367       High
cufflinks 0.956        
cufflinks 1.004        
cufflinks 0.793        
cufflinks 1.097       High
cufflinks 0.81        
cufflinks 0.876        
cufflinks 0.768        
cufflinks 0.797        

0 Strain