Gene : Pp3c19_10950 P. patens v3.3
Defline:  (1 of 9) PTHR23515:SF3 - HIGH AFFINITY NITRATE TRANSPORTER 2.5 Genomic Order:  540
Name:  ? Pp3c19_10950 Secondary Identifier:  ? PAC:32938355
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c19_10950 0.5kb upstream 0.5kb upstream 3962 true Chr19: 6902471-6906432 Physcomitrium patens
Pp3c19_10950 0.5kb upstream 0.5kb upstream 500 false Chr19: 6905933-6906432 Physcomitrium patens
Pp3c19_10950 0.5kb downstream 0.5kb downstream 3962 true Chr19: 6901971-6905932 Physcomitrium patens
Pp3c19_10950 0.5kb downstream 0.5kb downstream 500 false Chr19: 6901971-6902470 Physcomitrium patens
Pp3c19_10950 1.0kb upstream 1.0kb upstream 4462 true Chr19: 6902471-6906932 Physcomitrium patens
Pp3c19_10950 1.0kb upstream 1.0kb upstream 1000 false Chr19: 6905933-6906932 Physcomitrium patens
Pp3c19_10950 1.0kb downstream 1.0kb downstream 4462 true Chr19: 6901471-6905932 Physcomitrium patens
Pp3c19_10950 1.0kb downstream 1.0kb downstream 1000 false Chr19: 6901471-6902470 Physcomitrium patens
Pp3c19_10950 2.0kb upstream 2.0kb upstream 5462 true Chr19: 6902471-6907932 Physcomitrium patens
Pp3c19_10950 2.0kb upstream 2.0kb upstream 2000 false Chr19: 6905933-6907932 Physcomitrium patens
Pp3c19_10950 2.0kb downstream 2.0kb downstream 5462 true Chr19: 6900471-6905932 Physcomitrium patens
Pp3c19_10950 2.0kb downstream 2.0kb downstream 2000 false Chr19: 6900471-6902470 Physcomitrium patens
Pp3c19_10950 5.0kb upstream 5.0kb upstream 8462 true Chr19: 6902471-6910932 Physcomitrium patens
Pp3c19_10950 5.0kb upstream 5.0kb upstream 5000 false Chr19: 6905933-6910932 Physcomitrium patens
Pp3c19_10950 5.0kb downstream 5.0kb downstream 8462 true Chr19: 6897471-6905932 Physcomitrium patens
Pp3c19_10950 5.0kb downstream 5.0kb downstream 5000 false Chr19: 6897471-6902470 Physcomitrium patens
Pp3c19_10950 10.0kb upstream 10.0kb upstream 13462 true Chr19: 6902471-6915932 Physcomitrium patens
Pp3c19_10950 10.0kb upstream 10.0kb upstream 10000 false Chr19: 6905933-6915932 Physcomitrium patens
Pp3c19_10950 10.0kb downstream 10.0kb downstream 13462 true Chr19: 6892471-6905932 Physcomitrium patens
Pp3c19_10950 10.0kb downstream 10.0kb downstream 10000 false Chr19: 6892471-6902470 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121350710 5274 Embryophyte View MSA
123426832 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.021     Low  
cufflinks 0.046     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.255       High
cufflinks 0.113        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.004     Low Low
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.112        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.051     Low  
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.117        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.089     Low  
cufflinks 0.01     Low  
cufflinks 0.015     Low  
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.068     Low  

0 Strain