Gene : Pp3c19_16732 P. patens v3.3
Genomic Order:  780 Name:  ? Pp3c19_16732
Secondary Identifier:  ? PAC:32938191
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c19_16732 0.5kb upstream 0.5kb upstream 1380 true Chr19: 10956914-10958293 Physcomitrium patens
Pp3c19_16732 0.5kb upstream 0.5kb upstream 500 false Chr19: 10956914-10957413 Physcomitrium patens
Pp3c19_16732 0.5kb downstream 0.5kb downstream 1380 true Chr19: 10957414-10958793 Physcomitrium patens
Pp3c19_16732 0.5kb downstream 0.5kb downstream 500 false Chr19: 10958294-10958793 Physcomitrium patens
Pp3c19_16732 1.0kb upstream 1.0kb upstream 1880 true Chr19: 10956414-10958293 Physcomitrium patens
Pp3c19_16732 1.0kb upstream 1.0kb upstream 1000 false Chr19: 10956414-10957413 Physcomitrium patens
Pp3c19_16732 1.0kb downstream 1.0kb downstream 1880 true Chr19: 10957414-10959293 Physcomitrium patens
Pp3c19_16732 1.0kb downstream 1.0kb downstream 1000 false Chr19: 10958294-10959293 Physcomitrium patens
Pp3c19_16732 2.0kb upstream 2.0kb upstream 2880 true Chr19: 10955414-10958293 Physcomitrium patens
Pp3c19_16732 2.0kb upstream 2.0kb upstream 2000 false Chr19: 10955414-10957413 Physcomitrium patens
Pp3c19_16732 2.0kb downstream 2.0kb downstream 2880 true Chr19: 10957414-10960293 Physcomitrium patens
Pp3c19_16732 2.0kb downstream 2.0kb downstream 2000 false Chr19: 10958294-10960293 Physcomitrium patens
Pp3c19_16732 5.0kb upstream 5.0kb upstream 5880 true Chr19: 10952414-10958293 Physcomitrium patens
Pp3c19_16732 5.0kb upstream 5.0kb upstream 5000 false Chr19: 10952414-10957413 Physcomitrium patens
Pp3c19_16732 5.0kb downstream 5.0kb downstream 5880 true Chr19: 10957414-10963293 Physcomitrium patens
Pp3c19_16732 5.0kb downstream 5.0kb downstream 5000 false Chr19: 10958294-10963293 Physcomitrium patens
Pp3c19_16732 10.0kb upstream 10.0kb upstream 10880 true Chr19: 10947414-10958293 Physcomitrium patens
Pp3c19_16732 10.0kb upstream 10.0kb upstream 10000 false Chr19: 10947414-10957413 Physcomitrium patens
Pp3c19_16732 10.0kb downstream 10.0kb downstream 10880 true Chr19: 10957414-10968293 Physcomitrium patens
Pp3c19_16732 10.0kb downstream 10.0kb downstream 10000 false Chr19: 10958294-10968293 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121329919 5274 Embryophyte Singleton cluster - no MSA
123366903 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.006     Low High
cufflinks 0.002     Low  
cufflinks 0.004     Low  
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low High
cufflinks 0.002     Low  
cufflinks 0.003     Low  
cufflinks 0.008     Low High
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.006     Low High
cufflinks 0.005     Low High
cufflinks 0.003     Low  
cufflinks 0.001     Low Low
cufflinks 0.002     Low  
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.004     Low  
cufflinks 0.001     Low Low
cufflinks 0.004     Low  
cufflinks 0.001     Low Low

0 Strain