Gene : Pp3c20_20940 P. patens v3.3
Genomic Order:  967 Name:  ? Pp3c20_20940
Secondary Identifier:  ? PAC:32947078
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c20_20940 0.5kb upstream 0.5kb upstream 5654 true Chr20: 13810469-13816122 Physcomitrium patens
Pp3c20_20940 0.5kb upstream 0.5kb upstream 500 false Chr20: 13815623-13816122 Physcomitrium patens
Pp3c20_20940 0.5kb downstream 0.5kb downstream 5654 true Chr20: 13809969-13815622 Physcomitrium patens
Pp3c20_20940 0.5kb downstream 0.5kb downstream 500 false Chr20: 13809969-13810468 Physcomitrium patens
Pp3c20_20940 1.0kb upstream 1.0kb upstream 6154 true Chr20: 13810469-13816622 Physcomitrium patens
Pp3c20_20940 1.0kb upstream 1.0kb upstream 1000 false Chr20: 13815623-13816622 Physcomitrium patens
Pp3c20_20940 1.0kb downstream 1.0kb downstream 6154 true Chr20: 13809469-13815622 Physcomitrium patens
Pp3c20_20940 1.0kb downstream 1.0kb downstream 1000 false Chr20: 13809469-13810468 Physcomitrium patens
Pp3c20_20940 2.0kb upstream 2.0kb upstream 7154 true Chr20: 13810469-13817622 Physcomitrium patens
Pp3c20_20940 2.0kb upstream 2.0kb upstream 2000 false Chr20: 13815623-13817622 Physcomitrium patens
Pp3c20_20940 2.0kb downstream 2.0kb downstream 7154 true Chr20: 13808469-13815622 Physcomitrium patens
Pp3c20_20940 2.0kb downstream 2.0kb downstream 2000 false Chr20: 13808469-13810468 Physcomitrium patens
Pp3c20_20940 5.0kb upstream 5.0kb upstream 10154 true Chr20: 13810469-13820622 Physcomitrium patens
Pp3c20_20940 5.0kb upstream 5.0kb upstream 5000 false Chr20: 13815623-13820622 Physcomitrium patens
Pp3c20_20940 5.0kb downstream 5.0kb downstream 10154 true Chr20: 13805469-13815622 Physcomitrium patens
Pp3c20_20940 5.0kb downstream 5.0kb downstream 5000 false Chr20: 13805469-13810468 Physcomitrium patens
Pp3c20_20940 10.0kb upstream 10.0kb upstream 15154 true Chr20: 13810469-13825622 Physcomitrium patens
Pp3c20_20940 10.0kb upstream 10.0kb upstream 10000 false Chr20: 13815623-13825622 Physcomitrium patens
Pp3c20_20940 10.0kb downstream 10.0kb downstream 15154 true Chr20: 13800469-13815622 Physcomitrium patens
Pp3c20_20940 10.0kb downstream 10.0kb downstream 10000 false Chr20: 13800469-13810468 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121348221 5274 Embryophyte View MSA
123425836 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.292        
cufflinks 1.905        
cufflinks 2.527       High
cufflinks 1.118       Low
cufflinks 1.64        
cufflinks 2.828       High
cufflinks 3.45       High
cufflinks 2.902       High
cufflinks 1.614        
cufflinks 1.431        
cufflinks 1.794        
cufflinks 1.386        
cufflinks 1.196       Low
cufflinks 1.374        
cufflinks 2.651       High
cufflinks 1.578        
cufflinks 1.194       Low
cufflinks 1.636        
cufflinks 2.52       High
cufflinks 2.211        
cufflinks 1.004       Low
cufflinks 1.274        
cufflinks 2.023        
cufflinks 1.759        
cufflinks 3.042       High
cufflinks 1.357        
cufflinks 1.448        
cufflinks 1.283        
cufflinks 1.436        
cufflinks 1.127       Low

0 Strain